IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v89y2015icp147-157.html
   My bibliography  Save this article

A random-effect model approach for group variable selection

Author

Listed:
  • Lee, Sangin
  • Pawitan, Yudi
  • Lee, Youngjo

Abstract

We consider regression models with a group structure in explanatory variables. This structure is commonly seen in practice, but it is only recently realized that taking the information into account in the modeling process may improve both the interpretability and accuracy of the model. In this paper, we study a new approach to group variable selection using random-effect models. Specific distributional assumptions on random effects pertaining to a given structure lead to a new class of penalties that include some existing penalties. We also develop an efficient computational algorithm. Numerical studies are provided to demonstrate better sensitivity and specificity properties without sacrificing the prediction accuracy. Finally, we present some real-data applications of the proposed approach.

Suggested Citation

  • Lee, Sangin & Pawitan, Yudi & Lee, Youngjo, 2015. "A random-effect model approach for group variable selection," Computational Statistics & Data Analysis, Elsevier, vol. 89(C), pages 147-157.
    • Handle: RePEc:eee:csdana:v:89:y:2015:i:c:p:147-157
    DOI: 10.1016/j.csda.2015.02.020
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S016794731500081X
    Download Restriction: Full text for ScienceDirect subscribers only.
    File URL: https://libkey.io/10.1016/j.csda.2015.02.020?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    2. Youngjo Lee & John A. Nelder, 2006. "Double hierarchical generalized linear models (with discussion)," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 55(2), pages 139-185, April.
    3. Jian Huang & Shuange Ma & Huiliang Xie & Cun-Hui Zhang, 2009. "A group bridge approach for variable selection," Biometrika, Biometrika Trust, vol. 96(2), pages 339-355.
    4. Wei, Fengrong & Zhu, Hongxiao, 2012. "Group coordinate descent algorithms for nonconvex penalized regression," Computational Statistics & Data Analysis, Elsevier, vol. 56(2), pages 316-326.
    5. Lee, Youngjo & Oh, Hee-Seok, 2014. "A new sparse variable selection via random-effect model," Journal of Multivariate Analysis, Elsevier, vol. 125(C), pages 89-99.
    6. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    7. Ming Yuan & Yi Lin, 2006. "Model selection and estimation in regression with grouped variables," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(1), pages 49-67, February.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Lee, Sangin & Lee, Youngjo & Pawitan, Yudi, 2018. "Sparse pathway-based prediction models for high-throughput molecular data," Computational Statistics & Data Analysis, Elsevier, vol. 126(C), pages 125-135.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Lee, Sangin & Lee, Youngjo & Pawitan, Yudi, 2018. "Sparse pathway-based prediction models for high-throughput molecular data," Computational Statistics & Data Analysis, Elsevier, vol. 126(C), pages 125-135.
    2. Zhixuan Fu & Chirag R. Parikh & Bingqing Zhou, 2017. "Penalized variable selection in competing risks regression," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(3), pages 353-376, July.
    3. Loann David Denis Desboulets, 2018. "A Review on Variable Selection in Regression Analysis," Econometrics, MDPI, vol. 6(4), pages 1-27, November.
    4. Takumi Saegusa & Tianzhou Ma & Gang Li & Ying Qing Chen & Mei-Ling Ting Lee, 2020. "Variable Selection in Threshold Regression Model with Applications to HIV Drug Adherence Data," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 12(3), pages 376-398, December.
    5. Qu, Lianqiang & Song, Xinyuan & Sun, Liuquan, 2018. "Identification of local sparsity and variable selection for varying coefficient additive hazards models," Computational Statistics & Data Analysis, Elsevier, vol. 125(C), pages 119-135.
    6. Pei Wang & Shunjie Chen & Sijia Yang, 2022. "Recent Advances on Penalized Regression Models for Biological Data," Mathematics, MDPI, vol. 10(19), pages 1-24, October.
    7. Li Yun & O’Connor George T. & Dupuis Josée & Kolaczyk Eric, 2015. "Modeling gene-covariate interactions in sparse regression with group structure for genome-wide association studies," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 14(3), pages 265-277, June.
    8. Yanfang Zhang & Chuanhua Wei & Xiaolin Liu, 2022. "Group Logistic Regression Models with l p,q Regularization," Mathematics, MDPI, vol. 10(13), pages 1-15, June.
    9. Hu, Jianhua & Liu, Xiaoqian & Liu, Xu & Xia, Ningning, 2022. "Some aspects of response variable selection and estimation in multivariate linear regression," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    10. Young Joo Yoon & Cheolwoo Park & Erik Hofmeister & Sangwook Kang, 2012. "Group variable selection in cardiopulmonary cerebral resuscitation data for veterinary patients," Journal of Applied Statistics, Taylor & Francis Journals, vol. 39(7), pages 1605-1621, January.
    11. Yanming Li & Bin Nan & Ji Zhu, 2015. "Multivariate sparse group lasso for the multivariate multiple linear regression with an arbitrary group structure," Biometrics, The International Biometric Society, vol. 71(2), pages 354-363, June.
    12. Patrick Breheny, 2015. "The group exponential lasso for bi‐level variable selection," Biometrics, The International Biometric Society, vol. 71(3), pages 731-740, September.
    13. Wenyan Zhong & Xuewen Lu & Jingjing Wu, 2021. "Bi-level variable selection in semiparametric transformation models with right-censored data," Computational Statistics, Springer, vol. 36(3), pages 1661-1692, September.
    14. Kwon, Sunghoon & Oh, Seungyoung & Lee, Youngjo, 2016. "The use of random-effect models for high-dimensional variable selection problems," Computational Statistics & Data Analysis, Elsevier, vol. 103(C), pages 401-412.
    15. Diego Vidaurre & Concha Bielza & Pedro Larrañaga, 2013. "A Survey of L1 Regression," International Statistical Review, International Statistical Institute, vol. 81(3), pages 361-387, December.
    16. Karsten Schweikert, 2022. "Oracle Efficient Estimation of Structural Breaks in Cointegrating Regressions," Journal of Time Series Analysis, Wiley Blackwell, vol. 43(1), pages 83-104, January.
    17. Behrendt, Simon & Schweikert, Karsten, 2021. "A Note on Adaptive Group Lasso for Structural Break Time Series," Econometrics and Statistics, Elsevier, vol. 17(C), pages 156-172.
    18. Mingqiu Wang & Guo-Liang Tian, 2016. "Robust group non-convex estimations for high-dimensional partially linear models," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 28(1), pages 49-67, March.
    19. Karsten Schweikert, 2020. "Oracle Efficient Estimation of Structural Breaks in Cointegrating Regressions," Papers 2001.07949, arXiv.org, revised Apr 2021.
    20. Shanshan Qin & Hao Ding & Yuehua Wu & Feng Liu, 2021. "High-dimensional sign-constrained feature selection and grouping," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 73(4), pages 787-819, August.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:89:y:2015:i:c:p:147-157. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.