IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v54y2010i2p308-325.html
   My bibliography  Save this article

Core Shape modelling of a set of curves

Author

Listed:
  • Boudaoud, S.
  • Rix, H.
  • Meste, O.

Abstract

A new method for shape and time variability modelling of a set of curves is presented. Shape variability is captured via warping functions after time realignment of the curves. These warping functions relate normalized integrals but their meaning is different from those described in previously proposed methods for curve registration. For this purpose, a semi-parametric model, namely the Core Shape (CS) model, is proposed for shape variability characterization of a sample of curves. The curve variability is modelled as the composition of a polynomial term that accounts for time support variability and another term that accounts for intrinsic shape variability of the normalized integrals. This formalism provides specific statistical tools for shape dispersion analysis which are typically a mean shape curve, the Core Shape (CS) curve, and a shape distance, the so-called CS distance, according to the degree of specific polynomial time functions. These tools are invariant to time support variability and allow a direct access to intrinsic shape variability obtained at this polynomial degree. Also, a method for estimating shape parameters and functions of the model is presented and illustrated with simulated data. The influence of the polynomial choice is analyzed by simulation. Finally, usefulness of the proposed model for functional curve analysis is demonstrated through a real case study on Auditory Cortex Responses (ACR) analysis. A comparative study with a Curve Registration (CR) approach, namely the Self-Modelling Registration (SMR) method, is performed to better define differences in characterizing time and shape variability.

Suggested Citation

  • Boudaoud, S. & Rix, H. & Meste, O., 2010. "Core Shape modelling of a set of curves," Computational Statistics & Data Analysis, Elsevier, vol. 54(2), pages 308-325, February.
  • Handle: RePEc:eee:csdana:v:54:y:2010:i:2:p:308-325
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167-9473(09)00274-6
    Download Restriction: Full text for ScienceDirect subscribers only.
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Rong Tang & Hans-Georg Müller, 2008. "Pairwise curve synchronization for functional data," Biometrika, Biometrika Trust, vol. 95(4), pages 875-889.
    2. J. O. Ramsay, 1998. "Estimating smooth monotone functions," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 60(2), pages 365-375.
    3. Telesca, Donatello & Inoue, Lurdes Y.T., 2008. "Bayesian Hierarchical Curve Registration," Journal of the American Statistical Association, American Statistical Association, vol. 103, pages 328-339, March.
    4. Birgitte B. Rønn, 2001. "Nonparametric maximum likelihood estimation for shifted curves," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(2), pages 243-259.
    5. Xueli Liu & Hans-Georg Muller, 2004. "Functional Convex Averaging and Synchronization for Time-Warped Random Curves," Journal of the American Statistical Association, American Statistical Association, vol. 99, pages 687-699, January.
    6. Daniel Gervini & Theo Gasser, 2004. "Self‐modelling warping functions," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(4), pages 959-971, November.
    7. Daniel Gervini & Theo Gasser, 2005. "Nonparametric maximum likelihood estimation of the structural mean of a sample of curves," Biometrika, Biometrika Trust, vol. 92(4), pages 801-820, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Andrea Martino & Andrea Ghiglietti & Francesca Ieva & Anna Maria Paganoni, 2019. "A k-means procedure based on a Mahalanobis type distance for clustering multivariate functional data," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 28(2), pages 301-322, June.
    2. Sangalli, Laura M. & Secchi, Piercesare & Vantini, Simone & Vitelli, Valeria, 2010. "k-mean alignment for curve clustering," Computational Statistics & Data Analysis, Elsevier, vol. 54(5), pages 1219-1233, May.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Arribas-Gil, Ana & Müller, Hans-Georg, 2014. "Pairwise dynamic time warping for event data," Computational Statistics & Data Analysis, Elsevier, vol. 69(C), pages 255-268.
    2. Gerda Claeskens & Bernard W. Silverman & Leen Slaets, 2010. "A multiresolution approach to time warping achieved by a Bayesian prior–posterior transfer fitting strategy," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 72(5), pages 673-694, November.
    3. Jason Cleveland & Wei Wu & Anuj Srivastava, 2016. "Norm-preserving constraint in the Fisher--Rao registration and its application in signal estimation," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 28(2), pages 338-359, June.
    4. Liu, Xueli & Yang, Mark C.K., 2009. "Simultaneous curve registration and clustering for functional data," Computational Statistics & Data Analysis, Elsevier, vol. 53(4), pages 1361-1376, February.
    5. Daniel Gervini & Patrick A. Carter, 2014. "Warped functional analysis of variance," Biometrics, The International Biometric Society, vol. 70(3), pages 526-535, September.
    6. Cleveland, Jason & Zhao, Weilong & Wu, Wei, 2018. "Robust template estimation for functional data with phase variability using band depth," Computational Statistics & Data Analysis, Elsevier, vol. 125(C), pages 10-26.
    7. Tucker, J. Derek & Wu, Wei & Srivastava, Anuj, 2013. "Generative models for functional data using phase and amplitude separation," Computational Statistics & Data Analysis, Elsevier, vol. 61(C), pages 50-66.
    8. Zhang, Zhen & Müller, Hans-Georg, 2011. "Functional density synchronization," Computational Statistics & Data Analysis, Elsevier, vol. 55(7), pages 2234-2249, July.
    9. Dimeglio, Chloé & Gallón, Santiago & Loubes, Jean-Michel & Maza, Elie, 2014. "A robust algorithm for template curve estimation based on manifold embedding," Computational Statistics & Data Analysis, Elsevier, vol. 70(C), pages 373-386.
    10. Fang Yao & Yichao Wu & Jialin Zou, 2016. "Probability-enhanced effective dimension reduction for classifying sparse functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(1), pages 1-22, March.
    11. Juhyun Park & Jeongyoun Ahn, 2017. "Clustering multivariate functional data with phase variation," Biometrics, The International Biometric Society, vol. 73(1), pages 324-333, March.
    12. Alonso González, Pablo, 2013. "Dependency evolution in Spanish disabled population : a functional data analysis approach," DES - Working Papers. Statistics and Econometrics. WS ws130403, Universidad Carlos III de Madrid. Departamento de Estadística.
    13. Donatello Telesca & Lurdes Y.T. Inoue & Mauricio Neira & Ruth Etzioni & Martin Gleave & Colleen Nelson, 2009. "Differential Expression and Network Inferences through Functional Data Modeling," Biometrics, The International Biometric Society, vol. 65(3), pages 793-804, September.
    14. Sangalli, Laura M. & Secchi, Piercesare & Vantini, Simone & Vitelli, Valeria, 2010. "k-mean alignment for curve clustering," Computational Statistics & Data Analysis, Elsevier, vol. 54(5), pages 1219-1233, May.
    15. A. K. S. Alshabani & I. L. Dryden & C. D. Litton & J. Richardson, 2007. "Bayesian analysis of human movement curves," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 56(4), pages 415-428, August.
    16. Wagner, Heiko & Kneip, Alois, 2019. "Nonparametric registration to low-dimensional function spaces," Computational Statistics & Data Analysis, Elsevier, vol. 138(C), pages 49-63.
    17. Fang Yao & Yichao Wu & Jialin Zou, 2016. "Probability-enhanced effective dimension reduction for classifying sparse functional data," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(1), pages 1-22, March.
    18. Niels Lundtorp Olsen & Bo Markussen & Lars Lau Raket, 2018. "Simultaneous inference for misaligned multivariate functional data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 67(5), pages 1147-1176, November.
    19. Daniel Gervini & Theo Gasser, 2004. "Self‐modelling warping functions," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(4), pages 959-971, November.
    20. Charu Sharma & Amber Habib & Sunil Bowry, 2018. "Cluster analysis of stocks using price movements of high frequency data from National Stock Exchange," Papers 1803.09514, arXiv.org.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:54:y:2010:i:2:p:308-325. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.