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Model selection via Bayesian information capacity designs for generalised linear models

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  • Woods, David C.
  • McGree, James M.
  • Lewis, Susan M.

Abstract

The first investigation is made of designs for screening experiments where the response variable is approximated by a generalised linear model. A Bayesian information capacity criterion is defined for the selection of designs that are robust to the form of the linear predictor. For binomial data and logistic regression, the effectiveness of these designs for screening is assessed through simulation studies using all-subsets regression and model selection via maximum penalised likelihood and a generalised information criterion. For Poisson data and log-linear regression, similar assessments are made using maximum likelihood and the Akaike information criterion for minimally-supported designs that are constructed analytically. The results show that effective screening, that is, high power with moderate type I error rate and false discovery rate, can be achieved through suitable choices for the number of design support points and experiment size. Logistic regression is shown to present a more challenging problem than log-linear regression. Some areas for future work are also indicated.

Suggested Citation

  • Woods, David C. & McGree, James M. & Lewis, Susan M., 2017. "Model selection via Bayesian information capacity designs for generalised linear models," Computational Statistics & Data Analysis, Elsevier, vol. 113(C), pages 226-238.
  • Handle: RePEc:eee:csdana:v:113:y:2017:i:c:p:226-238
    DOI: 10.1016/j.csda.2016.10.025
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    References listed on IDEAS

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    1. J. López‐Fidalgo & C. Tommasi & P. C. Trandafir, 2007. "An optimal experimental design criterion for discriminating between non‐normal models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 69(2), pages 231-242, April.
    2. Friedman, Jerome H. & Hastie, Trevor & Tibshirani, Rob, 2010. "Regularization Paths for Generalized Linear Models via Coordinate Descent," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i01).
    3. Zhang, Yiyun & Li, Runze & Tsai, Chih-Ling, 2010. "Regularization Parameter Selections via Generalized Information Criterion," Journal of the American Statistical Association, American Statistical Association, vol. 105(489), pages 312-323.
    4. Ioannis Kosmidis & David Firth, 2009. "Bias reduction in exponential family nonlinear models," Biometrika, Biometrika Trust, vol. 96(4), pages 793-804.
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    1. Dehideniya, Mahasen B. & Drovandi, Christopher C. & McGree, James M., 2018. "Optimal Bayesian design for discriminating between models with intractable likelihoods in epidemiology," Computational Statistics & Data Analysis, Elsevier, vol. 124(C), pages 277-297.

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