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The Dantzig Selector in Cox's Proportional Hazards Model

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  • ANESTIS ANTONIADIS
  • PIOTR FRYZLEWICZ
  • FRÉDÉRIQUE LETUÉ

Abstract

. The Dantzig selector (DS) is a recent approach of estimation in high‐dimensional linear regression models with a large number of explanatory variables and a relatively small number of observations. As in the least absolute shrinkage and selection operator (LASSO), this approach sets certain regression coefficients exactly to zero, thus performing variable selection. However, such a framework, contrary to the LASSO, has never been used in regression models for survival data with censoring. A key motivation of this article is to study the estimation problem for Cox's proportional hazards (PH) function regression models using a framework that extends the theory, the computational advantages and the optimal asymptotic rate properties of the DS to the class of Cox's PH under appropriate sparsity scenarios. We perform a detailed simulation study to compare our approach with other methods and illustrate it on a well‐known microarray gene expression data set for predicting survival from gene expressions.

Suggested Citation

  • Anestis Antoniadis & Piotr Fryzlewicz & Frédérique Letué, 2010. "The Dantzig Selector in Cox's Proportional Hazards Model," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 37(4), pages 531-552, December.
  • Handle: RePEc:bla:scjsta:v:37:y:2010:i:4:p:531-552
    DOI: 10.1111/j.1467-9469.2009.00685.x
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    References listed on IDEAS

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    1. Hui Zou, 2008. "A note on path-based variable selection in the penalized proportional hazards model," Biometrika, Biometrika Trust, vol. 95(1), pages 241-247.
    2. Jovanovic, Borko D. & Hosmer, David W. & Buonaccorsi, John P., 1995. "Equivalence of several methods for efficient best subsets selection in generalized linear models," Computational Statistics & Data Analysis, Elsevier, vol. 20(1), pages 59-64, July.
    3. van Wieringen, Wessel N. & Kun, David & Hampel, Regina & Boulesteix, Anne-Laure, 2009. "Survival prediction using gene expression data: A review and comparison," Computational Statistics & Data Analysis, Elsevier, vol. 53(5), pages 1590-1603, March.
    4. Hao Helen Zhang & Wenbin Lu, 2007. "Adaptive Lasso for Cox's proportional hazards model," Biometrika, Biometrika Trust, vol. 94(3), pages 691-703.
    5. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    6. Bair, Eric & Hastie, Trevor & Paul, Debashis & Tibshirani, Robert, 2006. "Prediction by Supervised Principal Components," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 119-137, March.
    7. Wang, Hansheng & Leng, Chenlei, 2007. "Unified LASSO Estimation by Least Squares Approximation," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 1039-1048, September.
    8. Gareth M. James & Peter Radchenko, 2009. "A generalized Dantzig selector with shrinkage tuning," Biometrika, Biometrika Trust, vol. 96(2), pages 323-337.
    9. Torben Martinussen & Thomas H. Scheike, 2009. "Covariate Selection for the Semiparametric Additive Risk Model," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 36(4), pages 602-619, December.
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    Cited by:

    1. Li, Jianbo & Gu, Minggao & Zhang, Riquan, 2013. "Variable selection for general transformation models with right censored data via nonconcave penalties," Journal of Multivariate Analysis, Elsevier, vol. 115(C), pages 445-456.
    2. Jianbo Li & Yuan Li & Riquan Zhang, 2017. "B spline variable selection for the single index models," Statistical Papers, Springer, vol. 58(3), pages 691-706, September.
    3. Gerda Claeskens, 2012. "Focused estimation and model averaging with penalization methods: an overview," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 66(3), pages 272-287, August.
    4. Li, Jianbo & Gu, Minggao, 2012. "Adaptive LASSO for general transformation models with right censored data," Computational Statistics & Data Analysis, Elsevier, vol. 56(8), pages 2583-2597.

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