IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v73y2017i2p582-592.html
   My bibliography  Save this article

Integrative genetic risk prediction using non-parametric empirical Bayes classification

Author

Listed:
  • Sihai Dave Zhao

Abstract

No abstract is available for this item.

Suggested Citation

  • Sihai Dave Zhao, 2017. "Integrative genetic risk prediction using non-parametric empirical Bayes classification," Biometrics, The International Biometric Society, vol. 73(2), pages 582-592, June.
  • Handle: RePEc:bla:biomet:v:73:y:2017:i:2:p:582-592
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1111/biom.12619
    Download Restriction: Access to full text is restricted to subscribers.
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    2. Frank Dudbridge, 2013. "Power and Predictive Accuracy of Polygenic Risk Scores," PLOS Genetics, Public Library of Science, vol. 9(3), pages 1-17, March.
    3. Koenker, Roger & Mizera, Ivan, 2014. "Convex Optimization in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 60(i05).
    4. Jingchunzi Shi & Seunggeun Lee, 2016. "A novel random effect model for GWAS meta-analysis and its application to trans-ethnic meta-analysis," Biometrics, The International Biometric Society, vol. 72(3), pages 945-954, September.
    5. Qing Mai & Hui Zou & Ming Yuan, 2012. "A direct approach to sparse discriminant analysis in ultra-high dimensions," Biometrika, Biometrika Trust, vol. 99(1), pages 29-42.
    6. Roger Koenker & Ivan Mizera, 2014. "Convex Optimization, Shape Constraints, Compound Decisions, and Empirical Bayes Rules," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(506), pages 674-685, June.
    7. Jianqing Fan & Yang Feng & Xin Tong, 2012. "A road to classification in high dimensional space: the regularized optimal affine discriminant," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 74(4), pages 745-771, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Jianqing Fan & Yang Feng & Jiancheng Jiang & Xin Tong, 2016. "Feature Augmentation via Nonparametrics and Selection (FANS) in High-Dimensional Classification," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(513), pages 275-287, March.
    2. Feng, Long & Dicker, Lee H., 2018. "Approximate nonparametric maximum likelihood for mixture models: A convex optimization approach to fitting arbitrary multivariate mixing distributions," Computational Statistics & Data Analysis, Elsevier, vol. 122(C), pages 80-91.
    3. Sheng, Ying & Wang, Qihua, 2019. "Simultaneous variable selection and class fusion with penalized distance criterion based classifiers," Computational Statistics & Data Analysis, Elsevier, vol. 133(C), pages 138-152.
    4. Oda, Ryoya & Suzuki, Yuya & Yanagihara, Hirokazu & Fujikoshi, Yasunori, 2020. "A consistent variable selection method in high-dimensional canonical discriminant analysis," Journal of Multivariate Analysis, Elsevier, vol. 175(C).
    5. Wang, Yihe & Zhao, Sihai Dave, 2021. "A nonparametric empirical Bayes approach to large-scale multivariate regression," Computational Statistics & Data Analysis, Elsevier, vol. 156(C).
    6. Zeyu Wu & Cheng Wang & Weidong Liu, 2023. "A unified precision matrix estimation framework via sparse column-wise inverse operator under weak sparsity," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 75(4), pages 619-648, August.
    7. Qiang Sun & Hongtu Zhu & Yufeng Liu & Joseph G. Ibrahim, 2015. "SPReM: Sparse Projection Regression Model For High-Dimensional Linear Regression," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(509), pages 289-302, March.
    8. Jingning Zhang & Jianan Zhan & Jin Jin & Cheng Ma & Ruzhang Zhao & Jared O’Connell & Yunxuan Jiang & Bertram L. Koelsch & Haoyu Zhang & Nilanjan Chatterjee, 2024. "An ensemble penalized regression method for multi-ancestry polygenic risk prediction," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    9. Liu, Jianyu & Yu, Guan & Liu, Yufeng, 2019. "Graph-based sparse linear discriminant analysis for high-dimensional classification," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 250-269.
    10. Timothy B. Armstrong & Michal Kolesár & Mikkel Plagborg‐Møller, 2022. "Robust Empirical Bayes Confidence Intervals," Econometrica, Econometric Society, vol. 90(6), pages 2567-2602, November.
    11. Mai, Qing & Zou, Hui, 2015. "Sparse semiparametric discriminant analysis," Journal of Multivariate Analysis, Elsevier, vol. 135(C), pages 175-188.
    12. Lina Liao & Cheolwoo Park & Hosik Choi, 2019. "Penalized expectile regression: an alternative to penalized quantile regression," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 71(2), pages 409-438, April.
    13. Jiafeng Chen, 2022. "Empirical Bayes When Estimation Precision Predicts Parameters," Papers 2212.14444, arXiv.org, revised Apr 2024.
    14. Li Tan & Cory Koedel, 2019. "The Effects of Differential Income Replacement and Mortality on U.S. Social Security Redistribution," Southern Economic Journal, John Wiley & Sons, vol. 86(2), pages 613-637, October.
    15. Roger Koenker, 2017. "Bayesian deconvolution: an R vinaigrette," CeMMAP working papers 38/17, Institute for Fiscal Studies.
    16. Irina Gaynanova & James G. Booth & Martin T. Wells, 2016. "Simultaneous Sparse Estimation of Canonical Vectors in the ≫ Setting," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(514), pages 696-706, April.
    17. Jiaying Gu & Roger Koenker, 2020. "Invidious Comparisons: Ranking and Selection as Compound Decisions," Papers 2012.12550, arXiv.org, revised Sep 2021.
    18. Michael Gilraine & Jiaying Gu & Robert McMillan, 2021. "A Nonparametric Method for Estimating Teacher Value-Added," Working Papers tecipa-689, University of Toronto, Department of Economics.
    19. He, Yong & Zhang, Xinsheng & Wang, Pingping, 2016. "Discriminant analysis on high dimensional Gaussian copula model," Statistics & Probability Letters, Elsevier, vol. 117(C), pages 100-112.
    20. Pan, Yuqing & Mai, Qing, 2020. "Efficient computation for differential network analysis with applications to quadratic discriminant analysis," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:73:y:2017:i:2:p:582-592. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.