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Stepwise Signal Extraction via Marginal Likelihood

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  • Chao Du
  • Chu-Lan Michael Kao
  • S. C. Kou

Abstract

This article studies the estimation of a stepwise signal. To determine the number and locations of change-points of the stepwise signal, we formulate a maximum marginal likelihood estimator, which can be computed with a quadratic cost using dynamic programming. We carry out an extensive investigation on the choice of the prior distribution and study the asymptotic properties of the maximum marginal likelihood estimator. We propose to treat each possible set of change-points equally and adopt an empirical Bayes approach to specify the prior distribution of segment parameters. A detailed simulation study is performed to compare the effectiveness of this method with other existing methods. We demonstrate our method on single-molecule enzyme reaction data and on DNA array comparative genomic hybridization (CGH) data. Our study shows that this method is applicable to a wide range of models and offers appealing results in practice. Supplementary materials for this article are available online.

Suggested Citation

  • Chao Du & Chu-Lan Michael Kao & S. C. Kou, 2016. "Stepwise Signal Extraction via Marginal Likelihood," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(513), pages 314-330, March.
    • Handle: RePEc:taf:jnlasa:v:111:y:2016:i:513:p:314-330
    DOI: 10.1080/01621459.2015.1006365
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    Cited by:

    1. Ardia, David & Dufays, Arnaud & Ordás Criado, Carlos, 2023. "Linking Frequentist and Bayesian Change-Point Methods," MPRA Paper 119486, University Library of Munich, Germany.
    2. Florian Pein & Hannes Sieling & Axel Munk, 2017. "Heterogeneous change point inference," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 79(4), pages 1207-1227, September.
    3. Cho, Haeran & Kirch, Claudia, 2024. "Data segmentation algorithms: Univariate mean change and beyond," Econometrics and Statistics, Elsevier, vol. 30(C), pages 76-95.
    4. Inder Tecuapetla-Gómez & Axel Munk, 2017. "Autocovariance Estimation in Regression with a Discontinuous Signal and m-Dependent Errors: A Difference-Based Approach," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 44(2), pages 346-368, June.
    5. Lu Shaochuan, 2023. "Scalable Bayesian Multiple Changepoint Detection via Auxiliary Uniformisation," International Statistical Review, International Statistical Institute, vol. 91(1), pages 88-113, April.
    6. Fryzlewicz, Piotr, 2020. "Detecting possibly frequent change-points: Wild Binary Segmentation 2 and steepest-drop model selection," LSE Research Online Documents on Economics 103430, London School of Economics and Political Science, LSE Library.
    7. Yi, Taihe & Wang, Zhengming, 2017. "Bayesian sieve method for piece-wise smooth regression," Statistics & Probability Letters, Elsevier, vol. 130(C), pages 5-11.
    8. Wu Wang & Xuming He & Zhongyi Zhu, 2020. "Statistical inference for multiple change‐point models," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 47(4), pages 1149-1170, December.
    9. Chu-Lan Michael Kao & Emily Lin, 2023. "A new PIN model with application of the change-point detection method," Review of Quantitative Finance and Accounting, Springer, vol. 61(4), pages 1513-1528, November.

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