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Mutual information, phi-squared and model-based co-clustering for contingency tables

Author

Listed:
  • Gérard Govaert

    (U.M.R. C.N.R.S.)

  • Mohamed Nadif

    (University of Paris Descartes)

Abstract

Many of the datasets encountered in statistics are two-dimensional in nature and can be represented by a matrix. Classical clustering procedures seek to construct separately an optimal partition of rows or, sometimes, of columns. In contrast, co-clustering methods cluster the rows and the columns simultaneously and organize the data into homogeneous blocks (after suitable permutations). Methods of this kind have practical importance in a wide variety of applications such as document clustering, where data are typically organized in two-way contingency tables. Our goal is to offer coherent frameworks for understanding some existing criteria and algorithms for co-clustering contingency tables, and to propose new ones. We look at two different frameworks for the problem of co-clustering. The first involves minimizing an objective function based on measures of association and in particular on phi-squared and mutual information. The second uses a model-based co-clustering approach, and we consider two models: the block model and the latent block model. We establish connections between different approaches, criteria and algorithms, and we highlight a number of implicit assumptions in some commonly used algorithms. Our contribution is illustrated by numerical experiments on simulated and real-case datasets that show the relevance of the presented methods in the document clustering field.

Suggested Citation

  • Gérard Govaert & Mohamed Nadif, 2018. "Mutual information, phi-squared and model-based co-clustering for contingency tables," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 12(3), pages 455-488, September.
  • Handle: RePEc:spr:advdac:v:12:y:2018:i:3:d:10.1007_s11634-016-0274-6
    DOI: 10.1007/s11634-016-0274-6
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    References listed on IDEAS

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    Citations

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    Cited by:

    1. Lazhar Labiod & Mohamed Nadif, 2021. "Efficient regularized spectral data embedding," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 15(1), pages 99-119, March.
    2. Paul Riverain & Simon Fossier & Mohamed Nadif, 2023. "Poisson degree corrected dynamic stochastic block model," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 17(1), pages 135-162, March.
    3. Selosse, Margot & Jacques, Julien & Biernacki, Christophe, 2020. "Model-based co-clustering for mixed type data," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).
    4. Emilio Carrizosa & Vanesa Guerrero & Dolores Romero Morales, 2023. "On mathematical optimization for clustering categories in contingency tables," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 17(2), pages 407-429, June.

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