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Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance

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  • Yongli Liu
  • Jingli Chen
  • Shuai Wu
  • Zhizhong Liu
  • Hao Chao

Abstract

Clustering time series data is of great significance since it could extract meaningful statistics and other characteristics. Especially in biomedical engineering, outstanding clustering algorithms for time series may help improve the health level of people. Considering data scale and time shifts of time series, in this paper, we introduce two incremental fuzzy clustering algorithms based on a Dynamic Time Warping (DTW) distance. For recruiting Single-Pass and Online patterns, our algorithms could handle large-scale time series data by splitting it into a set of chunks which are processed sequentially. Besides, our algorithms select DTW to measure distance of pair-wise time series and encourage higher clustering accuracy because DTW could determine an optimal match between any two time series by stretching or compressing segments of temporal data. Our new algorithms are compared to some existing prominent incremental fuzzy clustering algorithms on 12 benchmark time series datasets. The experimental results show that the proposed approaches could yield high quality clusters and were better than all the competitors in terms of clustering accuracy.

Suggested Citation

  • Yongli Liu & Jingli Chen & Shuai Wu & Zhizhong Liu & Hao Chao, 2018. "Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance," PLOS ONE, Public Library of Science, vol. 13(5), pages 1-25, May.
  • Handle: RePEc:plo:pone00:0197499
    DOI: 10.1371/journal.pone.0197499
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    References listed on IDEAS

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    1. Yongli Liu & Shuai Wu & Zhizhong Liu & Hao Chao, 2017. "A fuzzy co-clustering algorithm for biomedical data," PLOS ONE, Public Library of Science, vol. 12(4), pages 1-18, April.
    2. Ronald L. Wasserstein & Nicole A. Lazar, 2016. "The ASA's Statement on p -Values: Context, Process, and Purpose," The American Statistician, Taylor & Francis Journals, vol. 70(2), pages 129-133, May.
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