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Reduced order modeling and analysis of the human complement system

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  • Adithya Sagar
  • Wei Dai
  • Mason Minot
  • Rachel LeCover
  • Jeffrey D Varner

Abstract

Complement is an important pathway in innate immunity, inflammation, and many disease processes. However, despite its importance, there are few validated mathematical models of complement activation. In this study, we developed an ensemble of experimentally validated reduced order complement models. We combined ordinary differential equations with logical rules to produce a compact yet predictive model of complement activation. The model, which described the lectin and alternative pathways, was an order of magnitude smaller than comparable models in the literature. We estimated an ensemble of model parameters from in vitro dynamic measurements of the C3a and C5a complement proteins. Subsequently, we validated the model on unseen C3a and C5a measurements not used for model training. Despite its small size, the model was surprisingly predictive. Global sensitivity and robustness analysis suggested complement was robust to any single therapeutic intervention. Only the simultaneous knockdown of both C3 and C5 consistently reduced C3a and C5a formation from all pathways. Taken together, we developed a validated mathematical model of complement activation that was computationally inexpensive, and could easily be incorporated into pre-existing or new pharmacokinetic models of immune system function. The model described experimental data, and predicted the need for multiple points of therapeutic intervention to fully disrupt complement activation.

Suggested Citation

  • Adithya Sagar & Wei Dai & Mason Minot & Rachel LeCover & Jeffrey D Varner, 2017. "Reduced order modeling and analysis of the human complement system," PLOS ONE, Public Library of Science, vol. 12(11), pages 1-21, November.
  • Handle: RePEc:plo:pone00:0187373
    DOI: 10.1371/journal.pone.0187373
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    References listed on IDEAS

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    1. Bing Liu & Jing Zhang & Pei Yi Tan & David Hsu & Anna M Blom & Benjamin Leong & Sunil Sethi & Bow Ho & Jeak Ling Ding & P S Thiagarajan, 2011. "A Computational and Experimental Study of the Regulatory Mechanisms of the Complement System," PLOS Computational Biology, Public Library of Science, vol. 7(1), pages 1-16, January.
    2. Kunyu Song & Kenan An & Guang Yang & Jiping Huang, 2012. "Risk-Return Relationship in a Complex Adaptive System," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-8, March.
    3. Deyan Luan & Michael Zai & Jeffrey D Varner, 2007. "Computationally Derived Points of Fragility of a Human Cascade Are Consistent with Current Therapeutic Strategies," PLOS Computational Biology, Public Library of Science, vol. 3(7), pages 1-13, July.
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