IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0021264.html
   My bibliography  Save this article

Phylogenetic Beta Diversity Metrics, Trait Evolution and Inferring the Functional Beta Diversity of Communities

Author

Listed:
  • Nathan G Swenson

Abstract

The beta diversity of communities along gradients has fascinated ecologists for decades. Traditionally such studies have focused on the species composition of communities, but researchers are becoming increasingly interested in analyzing the phylogenetic composition in the hope of achieving mechanistic insights into community structure. To date many metrics of phylogenetic beta diversity have been published, but few empirical studies have been published. Further inferences made from such phylogenetic studies critically rely on the pattern of trait evolution. The present work provides a study of the phylogenetic dissimilarity of 96 tree communities in India. The work compares and contrasts eight metrics of phylogenetic dissimilarity, considers the role of phylogenetic signal in trait data and shows that environmental distance rather than spatial distance is the best correlate of phylogenetic dissimilarity in the study system.

Suggested Citation

  • Nathan G Swenson, 2011. "Phylogenetic Beta Diversity Metrics, Trait Evolution and Inferring the Functional Beta Diversity of Communities," PLOS ONE, Public Library of Science, vol. 6(6), pages 1-9, June.
  • Handle: RePEc:plo:pone00:0021264
    DOI: 10.1371/journal.pone.0021264
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0021264
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0021264&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0021264?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Laura A Schreeg & W John Kress & David L Erickson & Nathan G Swenson, 2010. "Phylogenetic Analysis of Local-Scale Tree Soil Associations in a Lowland Moist Tropical Forest," PLOS ONE, Public Library of Science, vol. 5(10), pages 1-10, October.
    2. Mark Pagel, 1999. "Inferring the historical patterns of biological evolution," Nature, Nature, vol. 401(6756), pages 877-884, October.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Jian-Xiong Huang & Jian Zhang & Yong Shen & Ju-yu Lian & Hong-lin Cao & Wan-hui Ye & Lin-fang Wu & Yue Bin, 2014. "Different Relationships between Temporal Phylogenetic Turnover and Phylogenetic Similarity and in Two Forests Were Detected by a New Null Model," PLOS ONE, Public Library of Science, vol. 9(4), pages 1-7, April.
    2. Fan Yang & Zhuoen Liu & Guisheng Yang & Gang Feng, 2022. "Dominated Taxonomic and Phylogenetic Turnover but Functional Nestedness of Wetland Bird Beta Diversity in North China," Land, MDPI, vol. 11(7), pages 1-8, July.
    3. Chun-Huo Chiu & Anne Chao, 2014. "Distance-Based Functional Diversity Measures and Their Decomposition: A Framework Based on Hill Numbers," PLOS ONE, Public Library of Science, vol. 9(7), pages 1-17, July.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Rodrigo S Rios & Cristian Salgado-Luarte & Ernesto Gianoli, 2014. "Species Divergence and Phylogenetic Variation of Ecophysiological Traits in Lianas and Trees," PLOS ONE, Public Library of Science, vol. 9(6), pages 1-10, June.
    2. Aris Katzourakis & Gkikas Magiorkinis & Aaron G Lim & Sunetra Gupta & Robert Belshaw & Robert Gifford, 2014. "Larger Mammalian Body Size Leads to Lower Retroviral Activity," PLOS Pathogens, Public Library of Science, vol. 10(7), pages 1-11, July.
    3. Jonas Eberle & Renier Myburgh & Dirk Ahrens, 2014. "The Evolution of Morphospace in Phytophagous Scarab Chafers: No Competition - No Divergence?," PLOS ONE, Public Library of Science, vol. 9(5), pages 1-16, May.
    4. Mark C Mainwaring & Jenő Nagy & Mark E Hauber, 2021. "Sex-specific contributions to nest building in birds," Behavioral Ecology, International Society for Behavioral Ecology, vol. 32(6), pages 1075-1085.
    5. Annie Bissonnette & Mathias Franz & Oliver Schülke & Julia Ostner, 2014. "Socioecology, but not cognition, predicts male coalitions across primates," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(4), pages 794-801.
    6. Elspeth Kenny & Tim R. Birkhead & Jonathan P. Green, 2017. "Allopreening in birds is associated with parental cooperation over offspring care and stable pair bonds across years," Behavioral Ecology, International Society for Behavioral Ecology, vol. 28(4), pages 1142-1148.
    7. Fernandes, Heitor B.F. & Peñaherrera-Aguirre, Mateo & Woodley of Menie, Michael A. & Figueredo, Aurelio José, 2020. "Macroevolutionary patterns and selection modes for general intelligence (G) and for commonly used neuroanatomical volume measures in primates," Intelligence, Elsevier, vol. 80(C).
    8. L. M. Diele-Viegas & R. T. Figueroa & B. Vilela & C. F. D. Rocha, 2020. "Are reptiles toast? A worldwide evaluation of Lepidosauria vulnerability to climate change," Climatic Change, Springer, vol. 159(4), pages 581-599, April.
    9. Ricarda Laumeier & Martin Brändle & Mark-Oliver Rödel & Stefan Brunzel & Roland Brandl & Stefan Pinkert, 2023. "The global importance and interplay of colour-based protective and thermoregulatory functions in frogs," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    10. Anders Pape Møller & László Zsolt Garamszegi, 2012. "Between individual variation in risk-taking behavior and its life history consequences," Behavioral Ecology, International Society for Behavioral Ecology, vol. 23(4), pages 843-853.
    11. Brandon C. Wheeler & Clara J. Scarry & Andreas Koenig, 2013. "Rates of agonism among female primates: a cross-taxon perspective," Behavioral Ecology, International Society for Behavioral Ecology, vol. 24(6), pages 1369-1380.
    12. Aleksandar Stanojković & Svatopluk Skoupý & Hanna Johannesson & Petr Dvořák, 2024. "The global speciation continuum of the cyanobacterium Microcoleus," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    13. Alyson F Brokaw & Michael Smotherman, 2020. "Role of ecology in shaping external nasal morphology in bats and implications for olfactory tracking," PLOS ONE, Public Library of Science, vol. 15(1), pages 1-22, January.
    14. Jørgen S Søraker & Jonathan Wright & Fredrik Øglænd Hanslin & Michael Le Pepke, 2023. "The evolution of extra-pair paternity and paternal care in birds," Behavioral Ecology, International Society for Behavioral Ecology, vol. 34(5), pages 780-789.
    15. Cinar, Ozan & Nakagawa, Shinichi & Viechtbauer, Wolfgang, 2020. "Phylogenetic multilevel meta-analysis: A simulation study on the importance of modeling the phylogeny," EcoEvoRxiv su4zv, Center for Open Science.
    16. Vall-llosera, Miquel & Cassey, Phillip, 2017. "Physical attractiveness, constraints to the trade and handling requirements drive the variation in species availability in the Australian cagebird trade," Ecological Economics, Elsevier, vol. 131(C), pages 407-413.
    17. Woodley of Menie, Michael A. & Peñaherrera-Aguirre, Mateo & Jurgensen, JohnMichael, 2022. "Using macroevolutionary patterns to distinguish primary from secondary cognitive modules in primate cross-species performance data on five cognitive ability measures," Intelligence, Elsevier, vol. 92(C).
    18. Daniel S. Maynard & Lalasia Bialic-Murphy & Constantin M. Zohner & Colin Averill & Johan Hoogen & Haozhi Ma & Lidong Mo & Gabriel Reuben Smith & Alicia T. R. Acosta & Isabelle Aubin & Erika Berenguer , 2022. "Global relationships in tree functional traits," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    19. Eva Maria Griebeler & Jan Werner, 2018. "Formal comment on: Myhrvold (2016) Dinosaur metabolism and the allometry of maximum growth rate. PLoS ONE; 11(11): e0163205," PLOS ONE, Public Library of Science, vol. 13(2), pages 1-18, February.
    20. Seán Roberts & James Winters, 2013. "Linguistic Diversity and Traffic Accidents: Lessons from Statistical Studies of Cultural Traits," PLOS ONE, Public Library of Science, vol. 8(8), pages 1-13, August.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0021264. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.