ENCORE: Software for Quantitative Ensemble Comparison
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Abstract
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DOI: 10.1371/journal.pcbi.1004415
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References listed on IDEAS
- Wouter Boomsma & Jesper Ferkinghoff-Borg & Kresten Lindorff-Larsen, 2014. "Combining Experiments and Simulations Using the Maximum Entropy Principle," PLOS Computational Biology, Public Library of Science, vol. 10(2), pages 1-9, February.
- Kresten Lindorff-Larsen & Jesper Ferkinghoff-Borg, 2009. "Similarity Measures for Protein Ensembles," PLOS ONE, Public Library of Science, vol. 4(1), pages 1-13, January.
- Kresten Lindorff-Larsen & Robert B. Best & Mark A. DePristo & Christopher M. Dobson & Michele Vendruscolo, 2005. "Simultaneous determination of protein structure and dynamics," Nature, Nature, vol. 433(7022), pages 128-132, January.
- Simon Olsson & Jes Frellsen & Wouter Boomsma & Kanti V Mardia & Thomas Hamelryck, 2013. "Inference of Structure Ensembles of Flexible Biomolecules from Sparse, Averaged Data," PLOS ONE, Public Library of Science, vol. 8(11), pages 1-7, November.
- Anders Malmendal & Jarl Underhaug & Daniel E Otzen & Niels C Nielsen, 2010. "Fast Mapping of Global Protein Folding States by Multivariate NMR: A GPS for Proteins," PLOS ONE, Public Library of Science, vol. 5(4), pages 1-6, April.
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Cited by:
- F. Emil Thomasen & Tórur Skaalum & Ashutosh Kumar & Sriraksha Srinivasan & Stefano Vanni & Kresten Lindorff-Larsen, 2024. "Rescaling protein-protein interactions improves Martini 3 for flexible proteins in solution," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
- Claudia Lancey & Muhammad Tehseen & Souvika Bakshi & Matthew Percival & Masateru Takahashi & Mohamed A. Sobhy & Vlad S. Raducanu & Kerry Blair & Frederick W. Muskett & Timothy J. Ragan & Ramon Crehuet, 2021. "Cryo-EM structure of human Pol κ bound to DNA and mono-ubiquitylated PCNA," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
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