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Real-time bioelectronic sensing of environmental contaminants

Author

Listed:
  • Joshua T. Atkinson

    (Rice University
    Rice University
    University of Southern California)

  • Lin Su

    (Rice University
    Southeast University
    Lawrence Berkeley National Laboratory
    University of Cambridge)

  • Xu Zhang

    (Rice University)

  • George N. Bennett

    (Rice University
    Rice University)

  • Jonathan J. Silberg

    (Rice University
    Rice University
    Rice University)

  • Caroline M. Ajo-Franklin

    (Rice University
    Lawrence Berkeley National Laboratory
    Lawrence Berkeley National Laboratory)

Abstract

Real-time chemical sensing is crucial for applications in environmental and health monitoring1. Biosensors can detect a variety of molecules through genetic circuits that use these chemicals to trigger the synthesis of a coloured protein, thereby producing an optical signal2–4. However, the process of protein expression limits the speed of this sensing to approximately half an hour, and optical signals are often difficult to detect in situ5–8. Here we combine synthetic biology and materials engineering to develop biosensors that produce electrical readouts and have detection times of minutes. We programmed Escherichia coli to produce an electrical current in response to specific chemicals using a modular, eight-component, synthetic electron transport chain. As designed, this strain produced current following exposure to thiosulfate, an anion that causes microbial blooms, within 2 min. This amperometric sensor was then modified to detect an endocrine disruptor. The incorporation of a protein switch into the synthetic pathway and encapsulation of the bacteria with conductive nanomaterials enabled the detection of the endocrine disruptor in urban waterway samples within 3 min. Our results provide design rules to sense various chemicals with mass-transport-limited detection times and a new platform for miniature, low-power bioelectronic sensors that safeguard ecological and human health.

Suggested Citation

  • Joshua T. Atkinson & Lin Su & Xu Zhang & George N. Bennett & Jonathan J. Silberg & Caroline M. Ajo-Franklin, 2022. "Real-time bioelectronic sensing of environmental contaminants," Nature, Nature, vol. 611(7936), pages 548-553, November.
  • Handle: RePEc:nat:nature:v:611:y:2022:i:7936:d:10.1038_s41586-022-05356-y
    DOI: 10.1038/s41586-022-05356-y
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    Cited by:

    1. Yang Gao & Yuchen Zhou & Xudong Ji & Austin J. Graham & Christopher M. Dundas & Ismar E. Miniel Mahfoud & Bailey M. Tibbett & Benjamin Tan & Gina Partipilo & Ananth Dodabalapur & Jonathan Rivnay & Ben, 2024. "A hybrid transistor with transcriptionally controlled computation and plasticity," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    2. Jeong-Chan Lee & Su Yeong Kim & Jayeon Song & Hyowon Jang & Min Kim & Hanul Kim & Siyoung Q. Choi & Sunjoo Kim & Pawan Jolly & Taejoon Kang & Steve Park & Donald E. Ingber, 2024. "Micrometer-thick and porous nanocomposite coating for electrochemical sensors with exceptional antifouling and electroconducting properties," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    3. Sally Wang & Chen-Yu Chen & John R. Rzasa & Chen-Yu Tsao & Jinyang Li & Eric VanArsdale & Eunkyoung Kim & Fauziah Rahma Zakaria & Gregory F. Payne & William E. Bentley, 2023. "Redox-enabled electronic interrogation and feedback control of hierarchical and networked biological systems," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    4. Dalton R. George & Mark Danciu & Peter W. Davenport & Matthew R. Lakin & James Chappell & Emma K. Frow, 2024. "A bumpy road ahead for genetic biocontainment," Nature Communications, Nature, vol. 15(1), pages 1-5, December.

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