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Clofazimine broadly inhibits coronaviruses including SARS-CoV-2

Author

Listed:
  • Shuofeng Yuan

    (The University of Hong Kong
    The University of Hong Kong
    The University of Hong Kong–Shenzhen Hospital)

  • Xin Yin

    (Chinese Academy of Agricultural Sciences
    Sanford Burnham Prebys Medical Discovery Institute)

  • Xiangzhi Meng

    (The University of Hong Kong)

  • Jasper Fuk-Woo Chan

    (The University of Hong Kong
    The University of Hong Kong
    The University of Hong Kong–Shenzhen Hospital
    Hainan Medical University and The University of Hong Kong)

  • Zi-Wei Ye

    (The University of Hong Kong)

  • Laura Riva

    (Sanford Burnham Prebys Medical Discovery Institute
    Calibr, Scripps Research)

  • Lars Pache

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Chris Chun-Yiu Chan

    (The University of Hong Kong)

  • Pok-Man Lai

    (The University of Hong Kong)

  • Chris Chung-Sing Chan

    (The University of Hong Kong)

  • Vincent Kwok-Man Poon

    (The University of Hong Kong)

  • Andrew Chak-Yiu Lee

    (The University of Hong Kong)

  • Naoko Matsunaga

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Yuan Pu

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Chun-Kit Yuen

    (The University of Hong Kong)

  • Jianli Cao

    (The University of Hong Kong)

  • Ronghui Liang

    (The University of Hong Kong)

  • Kaiming Tang

    (The University of Hong Kong)

  • Li Sheng

    (The University of Hong Kong
    University of California Los Angeles)

  • Yushen Du

    (University of California Los Angeles)

  • Wan Xu

    (The University of Hong Kong)

  • Chit-Ying Lau

    (The University of Hong Kong)

  • Ko-Yung Sit

    (The University of Hong Kong, Queen Mary Hospital)

  • Wing-Kuk Au

    (The University of Hong Kong, Queen Mary Hospital)

  • Runming Wang

    (The University of Hong Kong)

  • Yu-Yuan Zhang

    (Chinese Academy of Agricultural Sciences)

  • Yan-Dong Tang

    (Chinese Academy of Agricultural Sciences)

  • Thomas Mandel Clausen

    (University of California San Diego
    University of Copenhagen)

  • Jessica Pihl

    (University of California San Diego
    University of Copenhagen)

  • Juntaek Oh

    (University of California San Diego
    University of California San Diego)

  • Kong-Hung Sze

    (The University of Hong Kong
    The University of Hong Kong)

  • Anna Jinxia Zhang

    (The University of Hong Kong
    The University of Hong Kong)

  • Hin Chu

    (The University of Hong Kong
    The University of Hong Kong)

  • Kin-Hang Kok

    (The University of Hong Kong
    The University of Hong Kong)

  • Dong Wang

    (University of California San Diego
    University of California San Diego)

  • Xue-Hui Cai

    (Chinese Academy of Agricultural Sciences)

  • Jeffrey D. Esko

    (University of California San Diego
    University of California San Diego)

  • Ivan Fan-Ngai Hung

    (The University of Hong Kong)

  • Ronald Adolphus Li

    (The University of Hong Kong)

  • Honglin Chen

    (The University of Hong Kong
    The University of Hong Kong)

  • Hongzhe Sun

    (The University of Hong Kong)

  • Dong-Yan Jin

    (The University of Hong Kong)

  • Ren Sun

    (The University of Hong Kong
    University of California Los Angeles)

  • Sumit K. Chanda

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Kwok-Yung Yuen

    (The University of Hong Kong
    The University of Hong Kong
    The University of Hong Kong–Shenzhen Hospital
    Hainan Medical University and The University of Hong Kong)

Abstract

The COVID-19 pandemic is the third outbreak this century of a zoonotic disease caused by a coronavirus, following the emergence of severe acute respiratory syndrome (SARS) in 20031 and Middle East respiratory syndrome (MERS) in 20122. Treatment options for coronaviruses are limited. Here we show that clofazimine—an anti-leprosy drug with a favourable safety profile3—possesses inhibitory activity against several coronaviruses, and can antagonize the replication of SARS-CoV-2 and MERS-CoV in a range of in vitro systems. We found that this molecule, which has been approved by the US Food and Drug Administration, inhibits cell fusion mediated by the viral spike glycoprotein, as well as activity of the viral helicase. Prophylactic or therapeutic administration of clofazimine in a hamster model of SARS-CoV-2 pathogenesis led to reduced viral loads in the lung and viral shedding in faeces, and also alleviated the inflammation associated with viral infection. Combinations of clofazimine and remdesivir exhibited antiviral synergy in vitro and in vivo, and restricted viral shedding from the upper respiratory tract. Clofazimine, which is orally bioavailable and comparatively cheap to manufacture, is an attractive clinical candidate for the treatment of outpatients and—when combined with remdesivir—in therapy for hospitalized patients with COVID-19, particularly in contexts in which costs are an important factor or specialized medical facilities are limited. Our data provide evidence that clofazimine may have a role in the control of the current pandemic of COVID-19 and—possibly more importantly—in dealing with coronavirus diseases that may emerge in the future.

Suggested Citation

  • Shuofeng Yuan & Xin Yin & Xiangzhi Meng & Jasper Fuk-Woo Chan & Zi-Wei Ye & Laura Riva & Lars Pache & Chris Chun-Yiu Chan & Pok-Man Lai & Chris Chung-Sing Chan & Vincent Kwok-Man Poon & Andrew Chak-Yi, 2021. "Clofazimine broadly inhibits coronaviruses including SARS-CoV-2," Nature, Nature, vol. 593(7859), pages 418-423, May.
  • Handle: RePEc:nat:nature:v:593:y:2021:i:7859:d:10.1038_s41586-021-03431-4
    DOI: 10.1038/s41586-021-03431-4
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    Citations

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    Cited by:

    1. Bo Qin & Ziheng Li & Kaiming Tang & Tongyun Wang & Yubin Xie & Sylvain Aumonier & Meitian Wang & Shuofeng Yuan & Sheng Cui, 2023. "Identification of the SARS-unique domain of SARS-CoV-2 as an antiviral target," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    2. Wei Qiao & Hui En Lau & Huizhi Xie & Vincent Kwok-Man Poon & Chris Chung-Sing Chan & Hin Chu & Shuofeng Yuan & Terrence Tsz-Tai Yuen & Kenn Ka-Heng Chik & Jessica Oi-Ling Tsang & Chris Chun-Yiu Chan &, 2022. "SARS-CoV-2 infection induces inflammatory bone loss in golden Syrian hamsters," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    3. Ronghui Liang & Zi-Wei Ye & Zhenzhi Qin & Yubin Xie & Xiaomeng Yang & Haoran Sun & Qiaohui Du & Peng Luo & Kaiming Tang & Bodan Hu & Jianli Cao & Xavier Hoi-Leong Wong & Guang-Sheng Ling & Hin Chu & J, 2024. "PMI-controlled mannose metabolism and glycosylation determines tissue tolerance and virus fitness," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    4. Leiping Zeng & Yanxia Liu & Xammy Huu Nguyenla & Timothy R. Abbott & Mengting Han & Yanyu Zhu & Augustine Chemparathy & Xueqiu Lin & Xinyi Chen & Haifeng Wang & Draven A. Rane & Jordan M. Spatz & Sake, 2022. "Broad-spectrum CRISPR-mediated inhibition of SARS-CoV-2 variants and endemic coronaviruses in vitro," Nature Communications, Nature, vol. 13(1), pages 1-16, December.

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