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Genomic epidemiology reveals multiple introductions of Zika virus into the United States

Author

Listed:
  • Nathan D. Grubaugh

    (The Scripps Research Institute)

  • Jason T. Ladner

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases)

  • Moritz U. G. Kraemer

    (University of Oxford
    Boston Children’s Hospital, Boston
    Harvard Medical School)

  • Gytis Dudas

    (Fred Hutchinson Cancer Research Center)

  • Amanda L. Tan

    (College of Arts and Sciences, Florida Gulf Coast University)

  • Karthik Gangavarapu

    (The Scripps Research Institute)

  • Michael R. Wiley

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases
    College of Public Health, University of Nebraska Medical Center)

  • Stephen White

    (Bureau of Public Health Laboratories)

  • Julien Thézé

    (University of Oxford)

  • Diogo M. Magnani

    (University of Miami Miller School of Medicine)

  • Karla Prieto

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases
    College of Public Health, University of Nebraska Medical Center)

  • Daniel Reyes

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases
    University of Nebraska Medical Center)

  • Andrea M. Bingham

    (Bureau of Epidemiology)

  • Lauren M. Paul

    (College of Arts and Sciences, Florida Gulf Coast University)

  • Refugio Robles-Sikisaka

    (The Scripps Research Institute)

  • Glenn Oliveira

    (Scripps Translational Science Institute)

  • Darryl Pronty

    (Bureau of Public Health Laboratories)

  • Carolyn M. Barcellona

    (College of Arts and Sciences, Florida Gulf Coast University)

  • Hayden C. Metsky

    (The Broad Institute of MIT and Harvard)

  • Mary Lynn Baniecki

    (The Broad Institute of MIT and Harvard)

  • Kayla G. Barnes

    (The Broad Institute of MIT and Harvard)

  • Bridget Chak

    (The Broad Institute of MIT and Harvard)

  • Catherine A. Freije

    (The Broad Institute of MIT and Harvard)

  • Adrianne Gladden-Young

    (The Broad Institute of MIT and Harvard)

  • Andreas Gnirke

    (The Broad Institute of MIT and Harvard)

  • Cynthia Luo

    (The Broad Institute of MIT and Harvard)

  • Bronwyn MacInnis

    (The Broad Institute of MIT and Harvard)

  • Christian B. Matranga

    (The Broad Institute of MIT and Harvard)

  • Daniel J. Park

    (The Broad Institute of MIT and Harvard)

  • James Qu

    (The Broad Institute of MIT and Harvard)

  • Stephen F. Schaffner

    (The Broad Institute of MIT and Harvard)

  • Christopher Tomkins-Tinch

    (The Broad Institute of MIT and Harvard)

  • Kendra L. West

    (The Broad Institute of MIT and Harvard)

  • Sarah M. Winnicki

    (The Broad Institute of MIT and Harvard)

  • Shirlee Wohl

    (The Broad Institute of MIT and Harvard)

  • Nathan L. Yozwiak

    (The Broad Institute of MIT and Harvard)

  • Joshua Quick

    (Institute of Microbiology and Infection, University of Birmingham)

  • Joseph R. Fauver

    (Immunology, and Pathology, Colorado State University)

  • Kamran Khan

    (Li Ka Shing Knowledge Institute, St Michael’s Hospital
    University of Toronto)

  • Shannon E. Brent

    (Li Ka Shing Knowledge Institute, St Michael’s Hospital)

  • Robert C. Reiner

    (Institute for Health Metrics and Evaluation, University of Washington)

  • Paola N. Lichtenberger

    (University of Miami Miller School of Medicine)

  • Michael J. Ricciardi

    (University of Miami Miller School of Medicine)

  • Varian K. Bailey

    (University of Miami Miller School of Medicine)

  • David I. Watkins

    (University of Miami Miller School of Medicine)

  • Marshall R. Cone

    (Bureau of Public Health Laboratories)

  • Edgar W. Kopp

    (Bureau of Public Health Laboratories)

  • Kelly N. Hogan

    (Bureau of Public Health Laboratories)

  • Andrew C. Cannons

    (Bureau of Public Health Laboratories)

  • Reynald Jean

    (Florida Department of Health in Miami-Dade County)

  • Andrew J. Monaghan

    (National Center for Atmospheric Research)

  • Robert F. Garry

    (Tulane University School of Medicine)

  • Nicholas J. Loman

    (Institute of Microbiology and Infection, University of Birmingham)

  • Nuno R. Faria

    (University of Oxford)

  • Mario C. Porcelli

    (Miami-Dade County Mosquito Control)

  • Chalmers Vasquez

    (Miami-Dade County Mosquito Control)

  • Elyse R. Nagle

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases
    University of Nebraska Medical Center)

  • Derek A. T. Cummings

    (University of Florida)

  • Danielle Stanek

    (Bureau of Epidemiology)

  • Andrew Rambaut

    (Institute of Evolutionary Biology, University of Edinburgh
    Fogarty International Center, National Institutes of Health)

  • Mariano Sanchez-Lockhart

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases
    University of Nebraska Medical Center)

  • Pardis C. Sabeti

    (The Broad Institute of MIT and Harvard
    Center for Systems Biology, Harvard University
    Harvard T.H. Chan School of Public Health, Harvard University
    Howard Hughes Medical Institute)

  • Leah D. Gillis

    (Bureau of Public Health Laboratories)

  • Scott F. Michael

    (College of Arts and Sciences, Florida Gulf Coast University)

  • Trevor Bedford

    (Fred Hutchinson Cancer Research Center)

  • Oliver G. Pybus

    (University of Oxford)

  • Sharon Isern

    (College of Arts and Sciences, Florida Gulf Coast University)

  • Gustavo Palacios

    (Center for Genome Sciences, US Army Medical Research Institute of Infectious Diseases)

  • Kristian G. Andersen

    (The Scripps Research Institute
    Scripps Translational Science Institute
    The Scripps Research Institute)

Abstract

Genome sequencing of Zika virus samples from infected patients and Aedes aegypti mosquitoes in Florida shows that the virus was probably introduced into the United States on multiple occasions, and that the Caribbean is the most likely source.

Suggested Citation

  • Nathan D. Grubaugh & Jason T. Ladner & Moritz U. G. Kraemer & Gytis Dudas & Amanda L. Tan & Karthik Gangavarapu & Michael R. Wiley & Stephen White & Julien Thézé & Diogo M. Magnani & Karla Prieto & Da, 2017. "Genomic epidemiology reveals multiple introductions of Zika virus into the United States," Nature, Nature, vol. 546(7658), pages 401-405, June.
    • Handle: RePEc:nat:nature:v:546:y:2017:i:7658:d:10.1038_nature22400
    DOI: 10.1038/nature22400
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    Cited by:

    1. Jordan Douglas & David Winter & Andrea McNeill & Sam Carr & Michael Bunce & Nigel French & James Hadfield & Joep Ligt & David Welch & Jemma L. Geoghegan, 2022. "Tracing the international arrivals of SARS-CoV-2 Omicron variants after Aotearoa New Zealand reopened its border," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    2. Vinyas Harish & Felipe J. Colón-González & Filipe R. R. Moreira & Rory Gibb & Moritz U. G. Kraemer & Megan Davis & Robert C. Reiner & David M. Pigott & T. Alex Perkins & Daniel J. Weiss & Isaac I. Bog, 2024. "Human movement and environmental barriers shape the emergence of dengue," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    3. Rory Gibb & Felipe J. Colón-González & Phan Trong Lan & Phan Thi Huong & Vu Sinh Nam & Vu Trong Duoc & Do Thai Hung & Nguyễn Thanh Dong & Vien Chinh Chien & Ly Thi Thuy Trang & Do Kien Quoc & Tran Min, 2023. "Interactions between climate change, urban infrastructure and mobility are driving dengue emergence in Vietnam," Nature Communications, Nature, vol. 14(1), pages 1-15, December.

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