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A living mesoscopic cellular automaton made of skin scales

Author

Listed:
  • Liana Manukyan

    (Laboratory of Artificial and Natural Evolution (LANE), University of Geneva
    SIB Swiss Institute of Bioinformatics)

  • Sophie A. Montandon

    (Laboratory of Artificial and Natural Evolution (LANE), University of Geneva)

  • Anamarija Fofonjka

    (Laboratory of Artificial and Natural Evolution (LANE), University of Geneva
    SIB Swiss Institute of Bioinformatics)

  • Stanislav Smirnov

    (University of Geneva
    Skolkovo Institute of Science and Technology
    Chebyshev Laboratory, St Petersburg State University)

  • Michel C. Milinkovitch

    (Laboratory of Artificial and Natural Evolution (LANE), University of Geneva
    SIB Swiss Institute of Bioinformatics)

Abstract

In vertebrates, skin colour patterns emerge from nonlinear dynamical microscopic systems of cell interactions. Here we show that in ocellated lizards a quasi-hexagonal lattice of skin scales, rather than individual chromatophore cells, establishes a green and black labyrinthine pattern of skin colour. We analysed time series of lizard scale colour dynamics over four years of their development and demonstrate that this pattern is produced by a cellular automaton (a grid of elements whose states are iterated according to a set of rules based on the states of neighbouring elements) that dynamically computes the colour states of individual mesoscopic skin scales to produce the corresponding macroscopic colour pattern. Using numerical simulations and mathematical derivation, we identify how a discrete von Neumann cellular automaton emerges from a continuous Turing reaction–diffusion system. Skin thickness variation generated by three-dimensional morphogenesis of skin scales causes the underlying reaction–diffusion dynamics to separate into microscopic and mesoscopic spatial scales, the latter generating a cellular automaton. Our study indicates that cellular automata are not merely abstract computational systems, but can directly correspond to processes generated by biological evolution.

Suggested Citation

  • Liana Manukyan & Sophie A. Montandon & Anamarija Fofonjka & Stanislav Smirnov & Michel C. Milinkovitch, 2017. "A living mesoscopic cellular automaton made of skin scales," Nature, Nature, vol. 544(7649), pages 173-179, April.
  • Handle: RePEc:nat:nature:v:544:y:2017:i:7649:d:10.1038_nature22031
    DOI: 10.1038/nature22031
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    Cited by:

    1. Guangjie Cui & Yunbo Liu & Di Zu & Xintao Zhao & Zhijia Zhang & Do Young Kim & Pramith Senaratne & Aaron Fox & David Sept & Younggeun Park & Somin Eunice Lee, 2023. "Phase intensity nanoscope (PINE) opens long-time investigation windows of living matter," Nature Communications, Nature, vol. 14(1), pages 1-10, December.

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