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Lytic to temperate switching of viral communities

Author

Listed:
  • B. Knowles

    (San Diego State University)

  • C. B. Silveira

    (San Diego State University
    Biology Institute, Rio de Janeiro Federal University)

  • B. A. Bailey

    (San Diego State University)

  • K. Barott

    (Hawaii Institute of Marine Biology, University of Hawaii at Manoa)

  • V. A. Cantu

    (Computational Science Research Center, San Diego State University)

  • A. G. Cobián-Güemes

    (San Diego State University)

  • F. H. Coutinho

    (Biology Institute, Rio de Janeiro Federal University
    Rainbow Rock, Ocean View)

  • E. A. Dinsdale

    (San Diego State University
    Rainbow Rock, Ocean View)

  • B. Felts

    (San Diego State University)

  • K. A. Furby

    (Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands)

  • E. E. George

    (San Diego State University)

  • K. T. Green

    (San Diego State University)

  • G. B. Gregoracci

    (Viral Information Institute, San Diego State University, 5500 Campanile Drive, San Diego, California 92182, USA)

  • A. F. Haas

    (San Diego State University)

  • J. M. Haggerty

    (San Diego State University)

  • E. R. Hester

    (San Diego State University)

  • N. Hisakawa

    (San Diego State University)

  • L. W. Kelly

    (San Diego State University)

  • Y. W. Lim

    (San Diego State University)

  • M. Little

    (San Diego State University)

  • A. Luque

    (San Diego State University
    Computational Science Research Center, San Diego State University)

  • T. McDole-Somera

    (Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands)

  • K. McNair

    (Computational Science Research Center, San Diego State University)

  • L. S. de Oliveira

    (Biology Institute, Rio de Janeiro Federal University)

  • S. D. Quistad

    (San Diego State University)

  • N. L. Robinett

    (San Diego State University)

  • E. Sala

    (Scripps Institution of Oceanography)

  • P. Salamon

    (San Diego State University
    University of California San Diego)

  • S. E. Sanchez

    (San Diego State University)

  • S. Sandin

    (Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands)

  • G. G. Z. Silva

    (Computational Science Research Center, San Diego State University)

  • J. Smith

    (Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands)

  • C. Sullivan

    (Sao Paulo Federal University - Baixada Santista)

  • C. Thompson

    (Biology Institute, Rio de Janeiro Federal University)

  • M. J. A. Vermeij

    (National Geographic Society
    University of California San Diego)

  • M. Youle

    (CARMABI Foundation)

  • C. Young

    (Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam)

  • B. Zgliczynski

    (Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands)

  • R. Brainard

    (Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam)

  • R. A. Edwards

    (Computational Science Research Center, San Diego State University
    Rainbow Rock, Ocean View)

  • J. Nulton

    (San Diego State University)

  • F. Thompson

    (Biology Institute, Rio de Janeiro Federal University)

  • F. Rohwer

    (San Diego State University
    University of California San Diego)

Abstract

An analysis of 24 coral reef viromes challenges the view that lytic phage are believed to predominate when the density of their hosts increase and shows instead that lysogeny is more important at high host densities; the authors also show that this model is consistent with predator–prey dynamics in a range of other ecosystems, such as animal-associated, sediment and soil systems.

Suggested Citation

  • B. Knowles & C. B. Silveira & B. A. Bailey & K. Barott & V. A. Cantu & A. G. Cobián-Güemes & F. H. Coutinho & E. A. Dinsdale & B. Felts & K. A. Furby & E. E. George & K. T. Green & G. B. Gregoracci & , 2016. "Lytic to temperate switching of viral communities," Nature, Nature, vol. 531(7595), pages 466-470, March.
    • Handle: RePEc:nat:nature:v:531:y:2016:i:7595:d:10.1038_nature17193
    DOI: 10.1038/nature17193
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    Citations

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    Cited by:

    1. Joachim Johansen & Damian R. Plichta & Jakob Nybo Nissen & Marie Louise Jespersen & Shiraz A. Shah & Ling Deng & Jakob Stokholm & Hans Bisgaard & Dennis Sandris Nielsen & Søren J. Sørensen & Simon Ras, 2022. "Genome binning of viral entities from bulk metagenomics data," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    2. Javier Lopez-Simon & Marina Vila-Nistal & Aleksandra Rosenova & Daniele Corte & Federico Baltar & Manuel Martinez-Garcia, 2023. "Viruses under the Antarctic Ice Shelf are active and potentially involved in global nutrient cycles," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
    3. Mengzhi Ji & Jiayin Zhou & Yan Li & Kai Ma & Wen Song & Yueyue Li & Jizhong Zhou & Qichao Tu, 2024. "Biodiversity of mudflat intertidal viromes along the Chinese coasts," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    4. Hu Liao & Hu Li & Chen-Song Duan & Xin-Yuan Zhou & Qiu-Ping Luo & Xin-Li An & Yong-Guan Zhu & Jian-Qiang Su, 2022. "Response of soil viral communities to land use changes," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
    5. Liyun An & Xinwu Liu & Jianwei Wang & Jinbo Xu & Xiaoli Chen & Xiaonan Liu & Bingxin Hu & Yong Nie & Xiao-Lei Wu, 2024. "Global diversity and ecological functions of viruses inhabiting oil reservoirs," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    6. Alexa M. Nicolas & Ella T. Sieradzki & Jennifer Pett-Ridge & Jillian F. Banfield & Michiko E. Taga & Mary K. Firestone & Steven J. Blazewicz, 2023. "A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil," Nature Communications, Nature, vol. 14(1), pages 1-16, December.

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