IDEAS home Printed from https://ideas.repec.org/a/nat/nature/v466y2010i7303d10.1038_nature09145.html
   My bibliography  Save this article

Single-cell NF-κB dynamics reveal digital activation and analogue information processing

Author

Listed:
  • Savaş Tay

    (Stanford University, Stanford, California 94305, USA
    Howard Hughes Medical Institute, Stanford, California 94305, USA)

  • Jacob J. Hughey

    (Stanford University, Stanford, California 94305, USA)

  • Timothy K. Lee

    (Stanford University, Stanford, California 94305, USA)

  • Tomasz Lipniacki

    (Institute of Fundamental Technological Research)

  • Stephen R. Quake

    (Stanford University, Stanford, California 94305, USA
    Howard Hughes Medical Institute, Stanford, California 94305, USA)

  • Markus W. Covert

    (Stanford University, Stanford, California 94305, USA)

Abstract

Single-cell information processing Multicellular organisms, particularly their immune systems, rely on complex cell-to-cell communications, the molecular mechanisms of which have been studied largely qualitatively, based on data averaged over heterogeneous cell populations. Now, Tay et al. have used high-throughput microfluidics to quantitatively measure the response of genes controlled by the DNA-binding protein NF-κB, in response to a wide (10,000-fold) range of doses of the cell–cell signalling molecule TNF-α, at the single-cell level in thousands of live cells. The results reveal all-or-none (digital) decisions of single cells at low levels of signalling, and graded (analogue) responses above.

Suggested Citation

  • Savaş Tay & Jacob J. Hughey & Timothy K. Lee & Tomasz Lipniacki & Stephen R. Quake & Markus W. Covert, 2010. "Single-cell NF-κB dynamics reveal digital activation and analogue information processing," Nature, Nature, vol. 466(7303), pages 267-271, July.
  • Handle: RePEc:nat:nature:v:466:y:2010:i:7303:d:10.1038_nature09145
    DOI: 10.1038/nature09145
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/nature09145
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1038/nature09145?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Gabriele Micali & Gerardo Aquino & David M Richards & Robert G Endres, 2015. "Accurate Encoding and Decoding by Single Cells: Amplitude Versus Frequency Modulation," PLOS Computational Biology, Public Library of Science, vol. 11(6), pages 1-21, June.
    2. Agne Tilūnaitė & Wayne Croft & Noah Russell & Tomas C Bellamy & Rüdiger Thul, 2017. "A Bayesian approach to modelling heterogeneous calcium responses in cell populations," PLOS Computational Biology, Public Library of Science, vol. 13(10), pages 1-25, October.
    3. Zhou, Peipei & Cai, Shuiming & Liu, Zengrong & Chen, Luonan & Wang, Ruiqi, 2013. "Coupling switches and oscillators as a means to shape cellular signals in biomolecular systems," Chaos, Solitons & Fractals, Elsevier, vol. 50(C), pages 115-126.
    4. Giorgos Minas & Dan J Woodcock & Louise Ashall & Claire V Harper & Michael R H White & David A Rand, 2020. "Multiplexing information flow through dynamic signalling systems," PLOS Computational Biology, Public Library of Science, vol. 16(8), pages 1-18, August.
    5. Martiny, Emil S. & Jensen, Mogens H. & Heltberg, Mathias S., 2022. "Detecting limit cycles in stochastic time series," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 605(C).
    6. Christopher C Govern & Arup K Chakraborty, 2013. "Stochastic Responses May Allow Genetically Diverse Cell Populations to Optimize Performance with Simpler Signaling Networks," PLOS ONE, Public Library of Science, vol. 8(8), pages 1-9, August.
    7. Johannes Witt & Fabian Konrath & Oliver Sawodny & Michael Ederer & Dagmar Kulms & Thomas Sauter, 2012. "Analysing the Role of UVB-Induced Translational Inhibition and PP2Ac Deactivation in NF-κB Signalling Using a Minimal Mathematical Model," PLOS ONE, Public Library of Science, vol. 7(7), pages 1-10, July.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:nature:v:466:y:2010:i:7303:d:10.1038_nature09145. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.