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An international study presenting a federated learning AI platform for pediatric brain tumors

Author

Listed:
  • Edward H. Lee

    (Stanford University School of Medicine
    Stanford University)

  • Michelle Han

    (Stanford University School of Medicine
    Children’s Hospital of Philadelphia)

  • Jason Wright

    (Seattle Children’s Hospital)

  • Michael Kuwabara

    (Phoenix Children’s Hospital)

  • Jacob Mevorach

    (Amazon Web Services)

  • Gang Fu

    (Amazon Web Services)

  • Olivia Choudhury

    (Amazon Web Services)

  • Ujjwal Ratan

    (Amazon Web Services)

  • Michael Zhang

    (Stanford University School of Medicine)

  • Matthias W. Wagner

    (University Hospital Augsburg)

  • Robert Goetti

    (The Children’s Hospital at Westmead)

  • Sebastian Toescu

    (Great Ormond Street Hospital for Children)

  • Sebastien Perreault

    (Université de Montréal)

  • Hakan Dogan

    (Koç University School of Medicine)

  • Emre Altinmakas

    (Icahn School of Medicine at Mount Sinai)

  • Maryam Mohammadzadeh

    (Tehran University of Medical Sciences)

  • Kathryn A. Szymanski

    (Phoenix Children’s Hospital
    Creighton University School of Medicine—Phoenix Regional Campus)

  • Cynthia J. Campen

    (Stanford University Medical School)

  • Hollie Lai

    (Children’s Hospital of Orange County)

  • Azam Eghbal

    (Children’s Hospital of Orange County)

  • Alireza Radmanesh

    (New York University Grossman School of Medicine
    Kaiser Los Angeles)

  • Kshitij Mankad

    (Great Ormond Street Hospital for Children)

  • Kristian Aquilina

    (Great Ormond Street Hospital for Children)

  • Mourad Said

    (Centre International Carthage Médicale)

  • Arastoo Vossough

    (Children’s Hospital of Philadelphia)

  • Ozgur Oztekin

    (Tepecik Education and Research Hospital
    Hamad Medical Corporation)

  • Birgit Ertl-Wagner

    (The Hospital for Sick Children)

  • Tina Poussaint

    (Boston Children’s Hospital)

  • Eric M. Thompson

    (Duke Children’s Hospital & Health Center)

  • Chang Y. Ho

    (Riley Children’s Hospital)

  • Alok Jaju

    (Phoenix Children’s Hospital)

  • John Curran

    (Phoenix Children’s Hospital)

  • Vijay Ramaswamy

    (The Hospital for Sick Children)

  • Samuel H. Cheshier

    (University of Utah School of Medicine)

  • Gerald A. Grant

    (Duke Children’s Hospital & Health Center)

  • S. Simon Wong

    (Stanford University)

  • Michael E. Moseley

    (Stanford University)

  • Robert M. Lober

    (Dayton Children’s Hospital)

  • Mattias Wilms

    (University of Calgary
    University of Calgary
    University of Calgary)

  • Nils D. Forkert

    (University of Calgary
    University of Calgary)

  • Nicholas A. Vitanza

    (Seattle Children’s Research Institute)

  • Jeffrey H. Miller

    (Phoenix Children’s Hospital)

  • Laura M. Prolo

    (Stanford University School of Medicine)

  • Kristen W. Yeom

    (Stanford University School of Medicine
    Phoenix Children’s Hospital)

Abstract

While multiple factors impact disease, artificial intelligence (AI) studies in medicine often use small, non-diverse patient cohorts due to data sharing and privacy issues. Federated learning (FL) has emerged as a solution, enabling training across hospitals without direct data sharing. Here, we present FL-PedBrain, an FL platform for pediatric posterior fossa brain tumors, and evaluate its performance on a diverse, realistic, multi-center cohort. Pediatric brain tumors were targeted due to the scarcity of such datasets, even in tertiary care hospitals. Our platform orchestrates federated training for joint tumor classification and segmentation across 19 international sites. FL-PedBrain exhibits less than a 1.5% decrease in classification and a 3% reduction in segmentation performance compared to centralized data training. FL boosts segmentation performance by 20 to 30% on three external, out-of-network sites. Finally, we explore the sources of data heterogeneity and examine FL robustness in real-world scenarios with data imbalances.

Suggested Citation

  • Edward H. Lee & Michelle Han & Jason Wright & Michael Kuwabara & Jacob Mevorach & Gang Fu & Olivia Choudhury & Ujjwal Ratan & Michael Zhang & Matthias W. Wagner & Robert Goetti & Sebastian Toescu & Se, 2024. "An international study presenting a federated learning AI platform for pediatric brain tumors," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-51172-5
    DOI: 10.1038/s41467-024-51172-5
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    References listed on IDEAS

    as
    1. Bao Feng & Jiangfeng Shi & Liebin Huang & Zhiqi Yang & Shi-Ting Feng & Jianpeng Li & Qinxian Chen & Huimin Xue & Xiangguang Chen & Cuixia Wan & Qinghui Hu & Enming Cui & Yehang Chen & Wansheng Long, 2024. "Robustly federated learning model for identifying high-risk patients with postoperative gastric cancer recurrence," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    2. Sarthak Pati & Ujjwal Baid & Brandon Edwards & Micah Sheller & Shih-Han Wang & G. Anthony Reina & Patrick Foley & Alexey Gruzdev & Deepthi Karkada & Christos Davatzikos & Chiharu Sako & Satyam Ghodasa, 2022. "Federated learning enables big data for rare cancer boundary detection," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    3. Jiawei Shao & Fangzhao Wu & Jun Zhang, 2024. "Selective knowledge sharing for privacy-preserving federated distillation without a good teacher," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    4. Shivam Kalra & Junfeng Wen & Jesse C. Cresswell & Maksims Volkovs & H. R. Tizhoosh, 2023. "Decentralized federated learning through proxy model sharing," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
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