Single-cell transcriptional profile of CD34+ hematopoietic progenitor cells from del(5q) myelodysplastic syndromes and impact of lenalidomide
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DOI: 10.1038/s41467-024-49529-x
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- Akdes Serin Harmanci & Arif O. Harmanci & Xiaobo Zhou, 2020. "CaSpER identifies and visualizes CNV events by integrative analysis of single-cell or bulk RNA-sequencing data," Nature Communications, Nature, vol. 11(1), pages 1-16, December.
- Jordan W. Squair & Matthieu Gautier & Claudia Kathe & Mark A. Anderson & Nicholas D. James & Thomas H. Hutson & Rémi Hudelle & Taha Qaiser & Kaya J. E. Matson & Quentin Barraud & Ariel J. Levine & Gio, 2021. "Confronting false discoveries in single-cell differential expression," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
- Nerea Berastegui & Marina Ainciburu & Juan P. Romero & Paula Garcia-Olloqui & Ana Alfonso-Pierola & Céline Philippe & Amaia Vilas-Zornoza & Patxi San Martin-Uriz & Raquel Ruiz-Hernández & Ander Abarra, 2022. "The transcription factor DDIT3 is a potential driver of dyserythropoiesis in myelodysplastic syndromes," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
- Benjamin L. Ebert & Jennifer Pretz & Jocelyn Bosco & Cindy Y. Chang & Pablo Tamayo & Naomi Galili & Azra Raza & David E. Root & Eyal Attar & Steven R. Ellis & Todd R. Golub, 2008. "Identification of RPS14 as a 5q- syndrome gene by RNA interference screen," Nature, Nature, vol. 451(7176), pages 335-339, January.
- Daniel Dimitrov & Dénes Türei & Martin Garrido-Rodriguez & Paul L. Burmedi & James S. Nagai & Charlotte Boys & Ricardo O. Ramirez Flores & Hyojin Kim & Bence Szalai & Ivan G. Costa & Alberto Valdeoliv, 2022. "Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
- Emmanuelle Supper & Saskia Rudat & Vivek Iyer & Alastair Droop & Kim Wong & Jean-François Spinella & Patrick Thomas & Guy Sauvageau & David J. Adams & Chi C. Wong, 2021. "Cut-like homeobox 1 (CUX1) tumor suppressor gene haploinsufficiency induces apoptosis evasion to sustain myeloid leukemia," Nature Communications, Nature, vol. 12(1), pages 1-20, December.
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