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Inherited C-terminal TREX1 variants disrupt homology-directed repair to cause senescence and DNA damage phenotypes in Drosophila, mice, and humans

Author

Listed:
  • Samuel D. Chauvin

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Shoichiro Ando

    (Niigata University)

  • Joe A. Holley

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Atsushi Sugie

    (Niigata University)

  • Fang R. Zhao

    (Washington University in Saint Louis)

  • Subhajit Poddar

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Rei Kato

    (Niigata University)

  • Cathrine A. Miner

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Yohei Nitta

    (Niigata University)

  • Siddharth R. Krishnamurthy

    (National Institute of Allergy and Infectious Diseases, National Institutes of Health
    National Institute of Allergy and Infectious Diseases, National Institutes of Health)

  • Rie Saito

    (Niigata University)

  • Yue Ning

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Yuya Hatano

    (Niigata University)

  • Sho Kitahara

    (Niigata University)

  • Shin Koide

    (Niigata University)

  • W. Alexander Stinson

    (Washington University in Saint Louis)

  • Jiayuan Fu

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Nehalee Surve

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Lindsay Kumble

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Wei Qian

    (Washington University in Saint Louis)

  • Oleksiy Polishchuk

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Prabhakar S. Andhey

    (Washington University in Saint Louis)

  • Cindy Chiang

    (The University of Chicago
    Cleveland Clinic)

  • Guanqun Liu

    (The University of Chicago
    Cleveland Clinic)

  • Ludovic Colombeau

    (PSL Research University)

  • Raphaël Rodriguez

    (PSL Research University)

  • Nicolas Manel

    (PSL Research University)

  • Akiyoshi Kakita

    (Niigata University)

  • Maxim N. Artyomov

    (Washington University in Saint Louis)

  • David C. Schultz

    (University of Pennsylvania)

  • P. Toby Coates

    (The Royal Adelaide Hospital
    University of Adelaide)

  • Elisha D. O. Roberson

    (Washington University in Saint Louis)

  • Yasmine Belkaid

    (National Institute of Allergy and Infectious Diseases, National Institutes of Health
    National Institute of Allergy and Infectious Diseases, National Institutes of Health
    Institut Pasteur)

  • Roger A. Greenberg

    (University of Pennsylvania)

  • Sara Cherry

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine)

  • Michaela U. Gack

    (The University of Chicago
    Cleveland Clinic)

  • Tristan Hardy

    (Monash IVF
    SA Pathology)

  • Osamu Onodera

    (Niigata University
    Niigata University)

  • Taisuke Kato

    (Niigata University)

  • Jonathan J. Miner

    (University of Pennsylvania Perelman School of Medicine
    University of Pennsylvania Perelman School of Medicine
    Washington University in Saint Louis
    University of Pennsylvania Perelman School of Medicine)

Abstract

Age-related microangiopathy, also known as small vessel disease (SVD), causes damage to the brain, retina, liver, and kidney. Based on the DNA damage theory of aging, we reasoned that genomic instability may underlie an SVD caused by dominant C-terminal variants in TREX1, the most abundant 3′−5′ DNA exonuclease in mammals. C-terminal TREX1 variants cause an adult-onset SVD known as retinal vasculopathy with cerebral leukoencephalopathy (RVCL or RVCL-S). In RVCL, an aberrant, C-terminally truncated TREX1 mislocalizes to the nucleus due to deletion of its ER-anchoring domain. Since RVCL pathology mimics that of radiation injury, we reasoned that nuclear TREX1 would cause DNA damage. Here, we show that RVCL-associated TREX1 variants trigger DNA damage in humans, mice, and Drosophila, and that cells expressing RVCL mutant TREX1 are more vulnerable to DNA damage induced by chemotherapy and cytokines that up-regulate TREX1, leading to depletion of TREX1-high cells in RVCL mice. RVCL-associated TREX1 mutants inhibit homology-directed repair (HDR), causing DNA deletions and vulnerablility to PARP inhibitors. In women with RVCL, we observe early-onset breast cancer, similar to patients with BRCA1/2 variants. Our results provide a mechanistic basis linking aberrant TREX1 activity to the DNA damage theory of aging, premature senescence, and microvascular disease.

Suggested Citation

  • Samuel D. Chauvin & Shoichiro Ando & Joe A. Holley & Atsushi Sugie & Fang R. Zhao & Subhajit Poddar & Rei Kato & Cathrine A. Miner & Yohei Nitta & Siddharth R. Krishnamurthy & Rie Saito & Yue Ning & Y, 2024. "Inherited C-terminal TREX1 variants disrupt homology-directed repair to cause senescence and DNA damage phenotypes in Drosophila, mice, and humans," Nature Communications, Nature, vol. 15(1), pages 1-23, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49066-7
    DOI: 10.1038/s41467-024-49066-7
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    2. Claire Vanpouille-Box & Amandine Alard & Molykutty J. Aryankalayil & Yasmeen Sarfraz & Julie M. Diamond & Robert J. Schneider & Giorgio Inghirami & C. Norman Coleman & Silvia C. Formenti & Sandra Dema, 2017. "DNA exonuclease Trex1 regulates radiotherapy-induced tumour immunogenicity," Nature Communications, Nature, vol. 8(1), pages 1-15, August.
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