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A pair of atypical NLR-encoding genes confers Asian soybean rust resistance in soybean

Author

Listed:
  • Qingnan Hao

    (Chinese Academy of Agriculture Sciences
    Ministry of Agriculture and Rural Affairs)

  • Hongli Yang

    (Ministry of Agriculture and Rural Affairs)

  • Shuilian Chen

    (Chinese Academy of Agriculture Sciences)

  • Chanjuan Zhang

    (Chinese Academy of Agriculture Sciences)

  • Limiao Chen

    (Chinese Academy of Agriculture Sciences)

  • Dong Cao

    (Chinese Academy of Agriculture Sciences)

  • Songli Yuan

    (Ministry of Agriculture and Rural Affairs)

  • Wei Guo

    (Ministry of Agriculture and Rural Affairs)

  • Zhonglu Yang

    (Chinese Academy of Agriculture Sciences)

  • Yi Huang

    (Chinese Academy of Agriculture Sciences)

  • Yanhui Qu

    (The Graduate School of Chinese Academy of Agricultural Sciences)

  • Lucy Qin

    (Research Triangle Park)

  • Xiaoyan Sheng

    (Research Triangle Park)

  • Xueyan Wang

    (Research Triangle Park)

  • Chandrani Mitra

    (Research Triangle Park)

  • Heng Zhong

    (Research Triangle Park)

  • John Dawson

    (Research Triangle Park)

  • Eric Bumann

    (Research Triangle Park)

  • Wenling Wang

    (Research Triangle Park)

  • Yaping Jiang

    (Research Triangle Park)

  • Guozhu Tang

    (Research Triangle Park)

  • Ryan Carlin

    (Research Triangle Park)

  • Haifeng Chen

    (Chinese Academy of Agriculture Sciences)

  • Qingli Liu

    (Research Triangle Park)

  • Zhihui Shan

    (Ministry of Agriculture and Rural Affairs)

  • Xinan Zhou

    (Chinese Academy of Agriculture Sciences)

Abstract

Asian soybean rust (ASR), caused by Phakopsora pachyrhizi, is a devastating disease that is present in all major soybean-producing regions. The limited availability of resistant germplasm has resulted in a scarcity of commercial soybean cultivars that are resistant to the disease. To date, only the Chinese soybean landrace SX6907 has demonstrated an immune response to ASR. In this study, we present the isolation and characterization of Rpp6907-7 and Rpp6907-4, a gene pair that confer broad-spectrum resistance to ASR. Rpp6907-7 and Rpp6907-4 encode atypic nucleotide-binding leucine-rich repeat (NLR) proteins that are found to be required for NLR-mediated immunity. Genetic analysis shows that only Rpp6907-7 confers resistance, while Rpp6907-4 regulates Rpp6907-7 signaling activity by acting as a repressor in the absence of recognized effectors. Our work highlights the potential value of using Rpp6907 in developing resistant soybean cultivars.

Suggested Citation

  • Qingnan Hao & Hongli Yang & Shuilian Chen & Chanjuan Zhang & Limiao Chen & Dong Cao & Songli Yuan & Wei Guo & Zhonglu Yang & Yi Huang & Yanhui Qu & Lucy Qin & Xiaoyan Sheng & Xueyan Wang & Chandrani M, 2024. "A pair of atypical NLR-encoding genes confers Asian soybean rust resistance in soybean," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-47611-y
    DOI: 10.1038/s41467-024-47611-y
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    References listed on IDEAS

    as
    1. Min Xie & Claire Yik-Lok Chung & Man-Wah Li & Fuk-Ling Wong & Xin Wang & Ailin Liu & Zhili Wang & Alden King-Yung Leung & Tin-Hang Wong & Suk-Wah Tong & Zhixia Xiao & Kejing Fan & Ming-Sin Ng & Xinpen, 2019. "A reference-grade wild soybean genome," Nature Communications, Nature, vol. 10(1), pages 1-12, December.
    2. Yogesh K. Gupta & Francismar C. Marcelino-Guimarães & Cécile Lorrain & Andrew Farmer & Sajeet Haridas & Everton Geraldo Capote Ferreira & Valéria S. Lopes-Caitar & Liliane Santana Oliveira & Emmanuell, 2023. "Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
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