Optogenetic spatial patterning of cooperation in yeast populations
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-023-44379-5
Download full text from publisher
References listed on IDEAS
- Xianglai Li & Zhao Zhou & Wenna Li & Yajun Yan & Xiaolin Shen & Jia Wang & Xinxiao Sun & Qipeng Yuan, 2022. "Design of stable and self-regulated microbial consortia for chemical synthesis," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
- Dirk Benzinger & Mustafa Khammash, 2018. "Pulsatile inputs achieve tunable attenuation of gene expression variability and graded multi-gene regulation," Nature Communications, Nature, vol. 9(1), pages 1-10, December.
- Sonali Gupta & Tyler D. Ross & Marcella M. Gomez & Job L. Grant & Philip A. Romero & Ophelia S. Venturelli, 2020. "Investigating the dynamics of microbial consortia in spatially structured environments," Nature Communications, Nature, vol. 11(1), pages 1-15, December.
- Jeff Gore & Hyun Youk & Alexander van Oudenaarden, 2009. "Snowdrift game dynamics and facultative cheating in yeast," Nature, Nature, vol. 459(7244), pages 253-256, May.
- Jintao Liu & Arthur Prindle & Jacqueline Humphries & Marçal Gabalda-Sagarra & Munehiro Asally & Dong-yeon D. Lee & San Ly & Jordi Garcia-Ojalvo & Gürol M. Süel, 2015. "Metabolic co-dependence gives rise to collective oscillations within biofilms," Nature, Nature, vol. 523(7562), pages 550-554, July.
- Daniel Lelie & Akihiko Oka & Safiyh Taghavi & Junji Umeno & Ting-Jia Fan & Katherine E. Merrell & Sarah D. Watson & Lisa Ouellette & Bo Liu & Muyiwa Awoniyi & Yunjia Lai & Liang Chi & Kun Lu & Christo, 2021. "Rationally designed bacterial consortia to treat chronic immune-mediated colitis and restore intestinal homeostasis," Nature Communications, Nature, vol. 12(1), pages 1-17, December.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Yuzhen Zhang & Yukmi Cai & Bing Zhang & Yi-Heng P. Job Zhang, 2024. "Spatially structured exchange of metabolites enhances bacterial survival and resilience in biofilms," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
- Jorge Peña & Yannick Rochat, 2012. "Bipartite Graphs as Models of Population Structures in Evolutionary Multiplayer Games," PLOS ONE, Public Library of Science, vol. 7(9), pages 1-13, September.
- Ankit Gupta & Mustafa Khammash, 2022. "Frequency spectra and the color of cellular noise," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
- Gita Naseri, 2023. "A roadmap to establish a comprehensive platform for sustainable manufacturing of natural products in yeast," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
- Felix J H Hol & Peter Galajda & Krisztina Nagy & Rutger G Woolthuis & Cees Dekker & Juan E Keymer, 2013. "Spatial Structure Facilitates Cooperation in a Social Dilemma: Empirical Evidence from a Bacterial Community," PLOS ONE, Public Library of Science, vol. 8(10), pages 1-10, October.
- Kerry E Boyle & Hilary Monaco & Dave van Ditmarsch & Maxime Deforet & Joao B Xavier, 2015. "Integration of Metabolic and Quorum Sensing Signals Governing the Decision to Cooperate in a Bacterial Social Trait," PLOS Computational Biology, Public Library of Science, vol. 11(6), pages 1-26, June.
- Richard J. Lindsay & Philippa J. Holder & Mark Hewlett & Ivana Gudelj, 2024. "Experimental evolution of yeast shows that public-goods upregulation can evolve despite challenges from exploitative non-producers," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
- Peña, Jorge & Nöldeke, Georg & Lehmann, Laurent, 2014. "Relatedness and synergies of kind and scale in the evolution of helping," Working papers 2014/09, Faculty of Business and Economics - University of Basel.
- Brian McLoone & Wai-Tong Louis Fan & Adam Pham & Rory Smead & Laurence Loewe, 2018. "Stochasticity, Selection, and the Evolution of Cooperation in a Two-Level Moran Model of the Snowdrift Game," Complexity, Hindawi, vol. 2018, pages 1-14, February.
- Alicia Sanchez-Gorostiaga & Djordje Bajić & Melisa L Osborne & Juan F Poyatos & Alvaro Sanchez, 2019. "High-order interactions distort the functional landscape of microbial consortia," PLOS Biology, Public Library of Science, vol. 17(12), pages 1-34, December.
- Marco Archetti, 2018. "How to Analyze Models of Nonlinear Public Goods," Games, MDPI, vol. 9(2), pages 1-15, April.
- Lucas Henrion & Juan Andres Martinez & Vincent Vandenbroucke & Mathéo Delvenne & Samuel Telek & Andrew Zicler & Alexander Grünberger & Frank Delvigne, 2023. "Fitness cost associated with cell phenotypic switching drives population diversification dynamics and controllability," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
- István Scheuring, 2014. "Diffusive Public Goods and Coexistence of Cooperators and Cheaters on a 1D Lattice," PLOS ONE, Public Library of Science, vol. 9(7), pages 1-11, July.
- Qi Su & Lei Zhou & Long Wang, 2019. "Evolutionary multiplayer games on graphs with edge diversity," PLOS Computational Biology, Public Library of Science, vol. 15(4), pages 1-22, April.
- Zhang, Yifan & Shu, Gang & Li, Ya, 2017. "Strategy-updating depending on local environment enhances cooperation in prisoner’s dilemma game," Applied Mathematics and Computation, Elsevier, vol. 301(C), pages 224-232.
- Behar, Hilla & Brenner, Naama & Louzoun, Yoram, 2014. "Coexistence of productive and non-productive populations by fluctuation-driven spatio-temporal patterns," Theoretical Population Biology, Elsevier, vol. 96(C), pages 20-29.
- Jung Hun Park & Gábor Holló & Yolanda Schaerli, 2024. "From resonance to chaos by modulating spatiotemporal patterns through a synthetic optogenetic oscillator," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
- Karl P. Gerhardt & Satyajit D. Rao & Evan J. Olson & Oleg A. Igoshin & Jeffrey J. Tabor, 2021. "Independent control of mean and noise by convolution of gene expression distributions," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
- Vojislav Gligorovski & Ahmad Sadeghi & Sahand Jamal Rahi, 2023. "Multidimensional characterization of inducible promoters and a highly light-sensitive LOV-transcription factor," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
- Leighton T Izu & Tamás Bányász & Ye Chen-Izu, 2015. "Optimizing Population Variability to Maximize Benefit," PLOS ONE, Public Library of Science, vol. 10(12), pages 1-17, December.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-023-44379-5. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.