IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v14y2023i1d10.1038_s41467-023-42418-9.html
   My bibliography  Save this article

Preneoplastic liver colonization by 11p15.5 altered mosaic cells in young children with hepatoblastoma

Author

Listed:
  • Jill Pilet

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Theo Z. Hirsch

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Barkha Gupta

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Amélie Roehrig

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Guillaume Morcrette

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Aurore Pire

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Eric Letouzé

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Brice Fresneau

    (Gustave Roussy, Université Paris-Saclay, Department of Children and Adolescents Oncology)

  • Sophie Taque

    (CHU Rennes)

  • Laurence Brugières

    (Gustave Roussy, Université Paris-Saclay, Department of Children and Adolescents Oncology)

  • Sophie Branchereau

    (Paris-Saclay University)

  • Christophe Chardot

    (Université Paris Cité)

  • Isabelle Aerts

    (Institut Curie, PSL Research University, Oncology Center SIREDO)

  • Sabine Sarnacki

    (Université Paris Cité)

  • Monique Fabre

    (Pathology Department, Necker Enfants Malades Hospital, Université Paris Cité, AP-HP)

  • Catherine Guettier

    (Paris-Saclay University)

  • Sandra Rebouissou

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm)

  • Jessica Zucman-Rossi

    (Centre de Recherche des Cordeliers, Université Paris Cité, Sorbonne Université, Inserm
    Department of Oncology, Hopital Européen Georges Pompidou)

Abstract

Pediatric liver tumors are very rare tumors with the most common diagnosis being hepatoblastoma. While hepatoblastomas are predominantly sporadic, around 15% of cases develop as part of predisposition syndromes such as Beckwith-Wiedemann (11p15.5 locus altered). Here, we identify mosaic genetic alterations of 11p15.5 locus in the liver of hepatoblastoma patients without a clinical diagnosis of Beckwith-Wiedemann syndrome. We do not retrieve these alterations in children with other types of pediatric liver tumors. We show that mosaic 11p15.5 alterations in liver FFPE sections of hepatoblastoma patients display IGF2 overexpression and H19 downregulation together with an alteration of the liver zonation. Moreover, mosaic livers’ microenvironment is enriched in extracellular matrix and angiogenesis. Spatial transcriptomics and single-nucleus RNAseq analyses identify a 60-gene signature in 11p15.5 altered hepatocytes. These data provide insights for 11p15.5 mosaicism detection and its functional consequences during the early steps of carcinogenesis.

Suggested Citation

  • Jill Pilet & Theo Z. Hirsch & Barkha Gupta & Amélie Roehrig & Guillaume Morcrette & Aurore Pire & Eric Letouzé & Brice Fresneau & Sophie Taque & Laurence Brugières & Sophie Branchereau & Christophe Ch, 2023. "Preneoplastic liver colonization by 11p15.5 altered mosaic cells in young children with hepatoblastoma," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-42418-9
    DOI: 10.1038/s41467-023-42418-9
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-023-42418-9
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-023-42418-9?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Jean Charles Nault & Maxime Mallet & Camilla Pilati & Julien Calderaro & Paulette Bioulac-Sage & Christophe Laurent & Alexis Laurent & Daniel Cherqui & Charles Balabaud & Jessica Zucman-Rossi, 2013. "High frequency of telomerase reverse-transcriptase promoter somatic mutations in hepatocellular carcinoma and preneoplastic lesions," Nature Communications, Nature, vol. 4(1), pages 1-7, October.
    2. Genta Nagae & Shogo Yamamoto & Masashi Fujita & Takanori Fujita & Aya Nonaka & Takayoshi Umeda & Shiro Fukuda & Kenji Tatsuno & Kazuhiro Maejima & Akimasa Hayashi & Sho Kurihara & Masato Kojima & Tomo, 2021. "Genetic and epigenetic basis of hepatoblastoma diversity," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
    3. Amy T. Hark & Christopher J. Schoenherr & David J. Katz & Robert S. Ingram & John M. Levorse & Shirley M. Tilghman, 2000. "CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus," Nature, Nature, vol. 405(6785), pages 486-489, May.
    4. Fabio Iannelli & Agnese Collino & Shruti Sinha & Enrico Radaelli & Paola Nicoli & Lorenzo D’Antiga & Aurelio Sonzogni & Jamila Faivre & Marie Annick Buendia & Ekkehard Sturm & Richard J. Thompson & A., 2014. "Massive gene amplification drives paediatric hepatocellular carcinoma caused by bile salt export pump deficiency," Nature Communications, Nature, vol. 5(1), pages 1-12, September.
    5. Jean Charles Nault & Maxime Mallet & Camilla Pilati & Julien Calderaro & Paulette Bioulac-Sage & Christophe Laurent & Alexis Laurent & Daniel Cherqui & Charles Balabaud & Jessica Zucman-Rossi, 2013. "Correction: Corrigendum: High frequency of telomerase reverse-transcriptase promoter somatic mutations in hepatocellular carcinoma and preneoplastic lesions," Nature Communications, Nature, vol. 4(1), pages 1-1, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Siddharth Narayanan & Marion Dubarry & Conor Lawless & A Peter Banks & Darren J Wilkinson & Simon K Whitehall & David Lydall, 2015. "Quantitative Fitness Analysis Identifies exo1∆ and Other Suppressors or Enhancers of Telomere Defects in Schizosaccharomyces pombe," PLOS ONE, Public Library of Science, vol. 10(7), pages 1-15, July.
    2. Amélie Roehrig & Theo Z. Hirsch & Aurore Pire & Guillaume Morcrette & Barkha Gupta & Charles Marcaillou & Sandrine Imbeaud & Christophe Chardot & Emmanuel Gonzales & Emmanuel Jacquemin & Masahiro Seki, 2024. "Single-cell multiomics reveals the interplay of clonal evolution and cellular plasticity in hepatoblastoma," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    3. Jie Fang & Shivendra Singh & Changde Cheng & Sivaraman Natarajan & Heather Sheppard & Ahmed Abu-Zaid & Adam D. Durbin & Ha Won Lee & Qiong Wu & Jacob Steele & Jon P. Connelly & Hongjian Jin & Wenan Ch, 2023. "Genome-wide mapping of cancer dependency genes and genetic modifiers of chemotherapy in high-risk hepatoblastoma," Nature Communications, Nature, vol. 14(1), pages 1-27, December.
    4. Hanbing Song & Simon Bucher & Katherine Rosenberg & Margaret Tsui & Deviana Burhan & Daniel Hoffman & Soo-Jin Cho & Arun Rangaswami & Marcus Breese & Stanley Leung & María V. Pons Ventura & E. Alejand, 2022. "Single-cell analysis of hepatoblastoma identifies tumor signatures that predict chemotherapy susceptibility using patient-specific tumor spheroids," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    5. Funan He & Abhik M. Bandyopadhyay & Laura J. Klesse & Anna Rogojina & Sang H. Chun & Erin Butler & Taylor Hartshorne & Trevor Holland & Dawn Garcia & Korri Weldon & Luz-Nereida Perez Prado & Anne-Mari, 2023. "Genomic profiling of subcutaneous patient-derived xenografts reveals immune constraints on tumor evolution in childhood solid cancer," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    6. Roger Mulet-Lazaro & Stanley Herk & Margit Nuetzel & Aniko Sijs-Szabo & Noelia Díaz & Katherine Kelly & Claudia Erpelinck-Verschueren & Lucia Schwarzfischer-Pfeilschifter & Hanna Stanewsky & Ute Acker, 2024. "Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia," Nature Communications, Nature, vol. 15(1), pages 1-22, December.
    7. Clarice K. Y. Hong & Yawei Wu & Alyssa A. Erickson & Jie Li & Arnold J. Federico & Barak A. Cohen, 2024. "Massively parallel characterization of insulator activity across the genome," Nature Communications, Nature, vol. 15(1), pages 1-14, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-42418-9. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.