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Autocrine TGF-β-positive feedback in profibrotic AT2-lineage cells plays a crucial role in non-inflammatory lung fibrogenesis

Author

Listed:
  • Yasunori Enomoto

    (RIKEN Center for Biosystems Dynamics Research
    Hamamatsu University School of Medicine)

  • Hiroaki Katsura

    (RIKEN Center for Biosystems Dynamics Research)

  • Takashi Fujimura

    (RIKEN Center for Biosystems Dynamics Research
    Osaka Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd.)

  • Akira Ogata

    (RIKEN Center for Biosystems Dynamics Research)

  • Saori Baba

    (RIKEN Center for Biosystems Dynamics Research)

  • Akira Yamaoka

    (RIKEN Center for Biosystems Dynamics Research)

  • Miho Kihara

    (RIKEN Center for Biosystems Dynamics Research)

  • Takaya Abe

    (RIKEN Center for Biosystems Dynamics Research)

  • Osamu Nishimura

    (RIKEN Center for Biosystems Dynamics Research)

  • Mitsutaka Kadota

    (RIKEN Center for Biosystems Dynamics Research)

  • Daisuke Hazama

    (Kobe University Graduate School of Medicine)

  • Yugo Tanaka

    (Kobe University Graduate School of Medicine)

  • Yoshimasa Maniwa

    (Kobe University Graduate School of Medicine)

  • Tatsuya Nagano

    (Kobe University Graduate School of Medicine)

  • Mitsuru Morimoto

    (RIKEN Center for Biosystems Dynamics Research)

Abstract

The molecular etiology of idiopathic pulmonary fibrosis (IPF) has been extensively investigated to identify new therapeutic targets. Although anti-inflammatory treatments are not effective for patients with IPF, damaged alveolar epithelial cells play a critical role in lung fibrogenesis. Here, we establish an organoid-based lung fibrosis model using mouse and human lung tissues to assess the direct communication between damaged alveolar type II (AT2)-lineage cells and lung fibroblasts by excluding immune cells. Using this in vitro model and mouse genetics, we demonstrate that bleomycin causes DNA damage and activates p53 signaling in AT2-lineage cells, leading to AT2-to-AT1 transition-like state with a senescence-associated secretory phenotype (SASP). Among SASP-related factors, TGF-β plays an exclusive role in promoting lung fibroblast-to-myofibroblast differentiation. Moreover, the autocrine TGF-β-positive feedback loop in AT2-lineage cells is a critical cellular system in non-inflammatory lung fibrogenesis. These findings provide insights into the mechanism of IPF and potential therapeutic targets.

Suggested Citation

  • Yasunori Enomoto & Hiroaki Katsura & Takashi Fujimura & Akira Ogata & Saori Baba & Akira Yamaoka & Miho Kihara & Takaya Abe & Osamu Nishimura & Mitsutaka Kadota & Daisuke Hazama & Yugo Tanaka & Yoshim, 2023. "Autocrine TGF-β-positive feedback in profibrotic AT2-lineage cells plays a crucial role in non-inflammatory lung fibrogenesis," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-40617-y
    DOI: 10.1038/s41467-023-40617-y
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    1. Maximilian Strunz & Lukas M. Simon & Meshal Ansari & Jaymin J. Kathiriya & Ilias Angelidis & Christoph H. Mayr & George Tsidiridis & Marius Lange & Laura F. Mattner & Min Yee & Paulina Ogar & Arunima , 2020. "Alveolar regeneration through a Krt8+ transitional stem cell state that persists in human lung fibrosis," Nature Communications, Nature, vol. 11(1), pages 1-20, December.
    2. Suoqin Jin & Christian F. Guerrero-Juarez & Lihua Zhang & Ivan Chang & Raul Ramos & Chen-Hsiang Kuan & Peggy Myung & Maksim V. Plikus & Qing Nie, 2021. "Inference and analysis of cell-cell communication using CellChat," Nature Communications, Nature, vol. 12(1), pages 1-20, December.
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