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Cholesterol efflux from C1QB-expressing macrophages is associated with resistance to chimeric antigen receptor T cell therapy in primary refractory diffuse large B cell lymphoma

Author

Listed:
  • Zi-Xun Yan

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Yan Dong

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Niu Qiao

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Yi-Lun Zhang

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Wen Wu

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Yue Zhu

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Li Wang

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Shu Cheng

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Peng-Peng Xu

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Zi-Song Zhou

    (JW Therapeutics (Shanghai) Co. Ltd)

  • Ling-Shuang Sheng

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine)

  • Wei-Li Zhao

    (Ruijin Hospital Affiliated to Shanghai Jiao Tong University School of Medicine
    Laboratory of Molecular Pathology)

Abstract

Chimeric antigen receptor T (CAR-T) cell therapy has demonstrated promising efficacy in early trials for relapsed/refractory diffuse large B cell lymphoma (DLBCL). However, its efficacy in treating primary refractory DLBCL has not been comprehensively investigated, and the underlying resistance mechanisms remain unclear. Here, we report the outcomes of a phase I, open-label, single-arm clinical trial of relmacabtagene autoleucel (relma-cel), a CD19-targeted CAR-T cell product, with safety and efficacy as primary endpoints. Among the 12 enrolled patients, 8 experienced grade 4 hematologic toxicity of treatment-emergent adverse event. No grade ≥3 cytokine release syndrome or neurotoxicity occurred. Single-cell RNA sequencing revealed an increase proportion of C1QB-expressing macrophages in patients with progressive disease before CAR-T cell therapy. Cholesterol efflux from M2 macrophages was found to inhibit CAR-T cells cytotoxicity by inducing an immunosuppressive state in CD8+ T cells, leading to their exhaustion. Possible interactions between macrophages and CD8+ T cells, mediating lipid metabolism (AFR1-FAS), immune checkpoint activation, and T cell exhaustion (LGALS9-HAVCR2, CD86-CTLA4, and NECTIN2-TIGIT) were enhanced during disease progression. These findings suggest that cholesterol efflux from macrophages may trigger CD8+ T cell exhaustion, providing a rationale for metabolic reprogramming to counteract CAR-T treatment failure. Chinadrugtrials.org.cn identifier: CTR20200376.

Suggested Citation

  • Zi-Xun Yan & Yan Dong & Niu Qiao & Yi-Lun Zhang & Wen Wu & Yue Zhu & Li Wang & Shu Cheng & Peng-Peng Xu & Zi-Song Zhou & Ling-Shuang Sheng & Wei-Li Zhao, 2024. "Cholesterol efflux from C1QB-expressing macrophages is associated with resistance to chimeric antigen receptor T cell therapy in primary refractory diffuse large B cell lymphoma," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49495-4
    DOI: 10.1038/s41467-024-49495-4
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    References listed on IDEAS

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    1. Guohao Wang & Junji Xu & Jiangsha Zhao & Weiqin Yin & Dayong Liu & WanJun Chen & Steven X. Hou, 2020. "Arf1-mediated lipid metabolism sustains cancer cells and its ablation induces anti-tumor immune responses in mice," Nature Communications, Nature, vol. 11(1), pages 1-16, December.
    2. Suoqin Jin & Christian F. Guerrero-Juarez & Lihua Zhang & Ivan Chang & Raul Ramos & Chen-Hsiang Kuan & Peggy Myung & Maksim V. Plikus & Qing Nie, 2021. "Inference and analysis of cell-cell communication using CellChat," Nature Communications, Nature, vol. 12(1), pages 1-20, December.
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