MAPK inhibitor sensitivity scores predict sensitivity driven by the immune infiltration in pediatric low-grade gliomas
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DOI: 10.1038/s41467-023-40235-8
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- Zachary J. Reitman & Brenton R. Paolella & Guillaume Bergthold & Kristine Pelton & Sarah Becker & Robert Jones & Claire E. Sinai & Hayley Malkin & Ying Huang & Leslie Grimmet & Zachary T. Herbert & Yu, 2019. "Mitogenic and progenitor gene programmes in single pilocytic astrocytoma cells," Nature Communications, Nature, vol. 10(1), pages 1-17, December.
- Humsa S. Venkatesh & Wade Morishita & Anna C. Geraghty & Dana Silverbush & Shawn M. Gillespie & Marlene Arzt & Lydia T. Tam & Cedric Espenel & Anitha Ponnuswami & Lijun Ni & Pamelyn J. Woo & Kathryn R, 2019. "Electrical and synaptic integration of glioma into neural circuits," Nature, Nature, vol. 573(7775), pages 539-545, September.
- Varun Venkataramani & Dimitar Ivanov Tanev & Christopher Strahle & Alexander Studier-Fischer & Laura Fankhauser & Tobias Kessler & Christoph Körber & Markus Kardorff & Miriam Ratliff & Ruifan Xie & He, 2019. "Glutamatergic synaptic input to glioma cells drives brain tumour progression," Nature, Nature, vol. 573(7775), pages 532-538, September.
- Kosuke Yoshihara & Maria Shahmoradgoli & Emmanuel Martínez & Rahulsimham Vegesna & Hoon Kim & Wandaliz Torres-Garcia & Victor Treviño & Hui Shen & Peter W. Laird & Douglas A. Levine & Scott L. Carter , 2013. "Inferring tumour purity and stromal and immune cell admixture from expression data," Nature Communications, Nature, vol. 4(1), pages 1-11, December.
- Marta Olah & Vilas Menon & Naomi Habib & Mariko F. Taga & Yiyi Ma & Christina J. Yung & Maria Cimpean & Anthony Khairallah & Guillermo Coronas-Samano & Roman Sankowski & Dominic Grün & Alexandra A. Kr, 2020. "Single cell RNA sequencing of human microglia uncovers a subset associated with Alzheimer’s disease," Nature Communications, Nature, vol. 11(1), pages 1-18, December.
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