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A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants

Author

Listed:
  • Scotland E. Farley

    (Oregon Health & Science University
    Oregon Health & Science University)

  • Jennifer E. Kyle

    (Pacific Northwest National Laboratory (PNNL))

  • Hans C. Leier

    (Oregon Health & Science University)

  • Lisa M. Bramer

    (Pacific Northwest National Laboratory (PNNL))

  • Jules B. Weinstein

    (Oregon Health & Science University)

  • Timothy A. Bates

    (Oregon Health & Science University)

  • Joon-Yong Lee

    (Pacific Northwest National Laboratory (PNNL))

  • Thomas O. Metz

    (Pacific Northwest National Laboratory (PNNL))

  • Carsten Schultz

    (Oregon Health & Science University)

  • Fikadu G. Tafesse

    (Oregon Health & Science University)

Abstract

A comprehensive understanding of host dependency factors for SARS-CoV-2 remains elusive. Here, we map alterations in host lipids following SARS-CoV-2 infection using nontargeted lipidomics. We find that SARS-CoV-2 rewires host lipid metabolism, significantly altering hundreds of lipid species to effectively establish infection. We correlate these changes with viral protein activity by transfecting human cells with each viral protein and performing lipidomics. We find that lipid droplet plasticity is a key feature of infection and that viral propagation can be blocked by small-molecule glycerolipid biosynthesis inhibitors. We find that this inhibition was effective against the main variants of concern (alpha, beta, gamma, and delta), indicating that glycerolipid biosynthesis is a conserved host dependency factor that supports this evolving virus.

Suggested Citation

  • Scotland E. Farley & Jennifer E. Kyle & Hans C. Leier & Lisa M. Bramer & Jules B. Weinstein & Timothy A. Bates & Joon-Yong Lee & Thomas O. Metz & Carsten Schultz & Fikadu G. Tafesse, 2022. "A global lipid map reveals host dependency factors conserved across SARS-CoV-2 variants," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-31097-7
    DOI: 10.1038/s41467-022-31097-7
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    References listed on IDEAS

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    1. Nell Saunders & Blandine Monel & Nadège Cayet & Lorenzo Archetti & Hugo Moreno & Alexandre Jeanne & Agathe Marguier & Julian Buchrieser & Timothy Wai & Olivier Schwartz & Mathieu Fréchin, 2024. "Dynamic label-free analysis of SARS-CoV-2 infection reveals virus-induced subcellular remodeling," Nature Communications, Nature, vol. 15(1), pages 1-15, December.

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