IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-29016-x.html
   My bibliography  Save this article

The aberrant upregulation of exon 10-inclusive SREK1 through SRSF10 acts as an oncogenic driver in human hepatocellular carcinoma

Author

Listed:
  • Cunjie Chang

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Muthukumar Rajasekaran

    (National Cancer Centre)

  • Yiting Qiao

    (Zhejiang University)

  • Heng Dong

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Yu Wang

    (National Cancer Centre)

  • Hongping Xia

    (National Cancer Centre)

  • Amudha Deivasigamani

    (National Cancer Centre)

  • Minjie Wu

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Karthik Sekar

    (National Cancer Centre)

  • Hengjun Gao

    (Shandong University)

  • Mengqing Sun

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Yuqin Niu

    (Shihezi University)

  • Qian Li

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Lin Tao

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Zhen Yan

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Menglan Wang

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Shasha Chen

    (Taizhou Cancer Hospital)

  • Shujuan Zhao

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Dajing Chen

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Lina Li

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Fan Yang

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Haojin Gao

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Baodong Chen

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Ling Su

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University)

  • Liang Xu

    (National University of Singapore)

  • Ye Chen

    (National University of Singapore)

  • Veerabrahma Pratap Seshachalam

    (National Cancer Centre)

  • Gongxing Chen

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Jayantha Gunaratne

    (A*STAR, Biopolis Drive Proteos)

  • Wanjin Hong

    (A*STAR, Biopolis Drive Proteos)

  • Junping Shi

    (the Affiliated Hospital of Hangzhou Normal University)

  • Gongying Chen

    (the Affiliated Hospital of Hangzhou Normal University)

  • David S. Grierson

    (University of British Columbia)

  • Benoit Chabot

    (Université de Sherbrooke)

  • Tian Xie

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University)

  • Kam Man Hui

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    National Cancer Centre
    A*STAR, Biopolis Drive Proteos
    Duke-NUS Medical School)

  • Jianxiang Chen

    (the Affiliated Hospital of Hangzhou Normal University, Hangzhou Normal University
    Hangzhou Normal University
    National Cancer Centre)

Abstract

Deregulation of alternative splicing is implicated as a relevant source of molecular heterogeneity in cancer. However, the targets and intrinsic mechanisms of splicing in hepatocarcinogenesis are largely unknown. Here, we report a functional impact of a Splicing Regulatory Glutamine/Lysine-Rich Protein 1 (SREK1) variant and its regulator, Serine/arginine-rich splicing factor 10 (SRSF10). HCC patients with poor prognosis express higher levels of exon 10-inclusive SREK1 (SREK1L). SREK1L can sustain BLOC1S5-TXNDC5 (B-T) expression, a targeted gene of nonsense-mediated mRNA decay through inhibiting exon-exon junction complex binding with B-T to exert its oncogenic role. B-T plays its competing endogenous RNA role by inhibiting miR-30c-5p and miR-30e-5p, and further promoting the expression of downstream oncogenic targets SRSF10 and TXNDC5. Interestingly, SRSF10 can act as a splicing regulator for SREK1L to promote hepatocarcinogenesis via the formation of a SRSF10-associated complex. In summary, we demonstrate a SRSF10/SREK1L/B-T signalling loop to accelerate the hepatocarcinogenesis.

Suggested Citation

  • Cunjie Chang & Muthukumar Rajasekaran & Yiting Qiao & Heng Dong & Yu Wang & Hongping Xia & Amudha Deivasigamani & Minjie Wu & Karthik Sekar & Hengjun Gao & Mengqing Sun & Yuqin Niu & Qian Li & Lin Tao, 2022. "The aberrant upregulation of exon 10-inclusive SREK1 through SRSF10 acts as an oncogenic driver in human hepatocellular carcinoma," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29016-x
    DOI: 10.1038/s41467-022-29016-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-29016-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-022-29016-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Rajagopal, 2014. "The Human Factors," Palgrave Macmillan Books, in: Architecting Enterprise, chapter 9, pages 225-249, Palgrave Macmillan.
    2. Shao-Ming Shen & Yan Ji & Cheng Zhang & Shuang-Shu Dong & Shuo Yang & Zhong Xiong & Meng-Kai Ge & Yun Yu & Li Xia & Meng Guo & Jin-Ke Cheng & Jun-Ling Liu & Jian-Xiu Yu & Guo-Qiang Chen, 2018. "Nuclear PTEN safeguards pre-mRNA splicing to link Golgi apparatus for its tumor suppressive role," Nature Communications, Nature, vol. 9(1), pages 1-15, December.
    3. Chanseok Shin & Ying Feng & James L. Manley, 2004. "Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock," Nature, Nature, vol. 427(6974), pages 553-558, February.
    4. Xuexia Zhou & Xuebing Li & Yuanming Cheng & Wenwu Wu & Zhiqin Xie & Qiulei Xi & Jun Han & Guohao Wu & Jing Fang & Ying Feng, 2014. "BCLAF1 and its splicing regulator SRSF10 regulate the tumorigenic potential of colon cancer cells," Nature Communications, Nature, vol. 5(1), pages 1-11, December.
    5. Shimin Shuai & Hiromichi Suzuki & Ander Diaz-Navarro & Ferran Nadeu & Sachin A. Kumar & Ana Gutierrez-Fernandez & Julio Delgado & Magda Pinyol & Carlos López-Otín & Xose S. Puente & Michael D. Taylor , 2019. "The U1 spliceosomal RNA is recurrently mutated in multiple cancers," Nature, Nature, vol. 574(7780), pages 712-716, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Rahman, Shaikh Moksadur, 2020. "Relationship between Job Satisfaction and Turnover Intention: Evidence from Bangladesh," Asian Business Review, Asian Business Consortium, vol. 10(2), pages 99-108.
    2. Wang Kai, 2019. "Towards a Taxonomy of Idea Generation Techniques," Foundations of Management, Sciendo, vol. 11(1), pages 65-80, January.
    3. Bridgelall, Raj & Stubbing, Edward, 2021. "Forecasting the effects of autonomous vehicles on land use," Technological Forecasting and Social Change, Elsevier, vol. 163(C).
    4. Bevilacqua, Maurizio & Ciarapica, Filippo Emanuele, 2018. "Human factor risk management in the process industry: A case study," Reliability Engineering and System Safety, Elsevier, vol. 169(C), pages 149-159.
    5. Naveena Prakasam & Louisa Huxtable-Thomas, 2021. "Reddit: Affordances as an Enabler for Shifting Loyalties," Information Systems Frontiers, Springer, vol. 23(3), pages 723-751, June.
    6. Colin Jerolmack & Alexandra K. Murphy, 2019. "The Ethical Dilemmas and Social Scientific Trade-offs of Masking in Ethnography," Sociological Methods & Research, , vol. 48(4), pages 801-827, November.
    7. Valeriy Makarov & Albert Bakhtizin, 2014. "The Estimation Of The Regions’ Efficiency Of The Russian Federation Including The Intellectual Capital, The Characteristics Of Readiness For Innovation, Level Of Well-Being, And Quality Of Life," Economy of region, Centre for Economic Security, Institute of Economics of Ural Branch of Russian Academy of Sciences, vol. 1(4), pages 9-30.
    8. Zhao, Jing & Knoop, Victor L. & Wang, Meng, 2020. "Two-dimensional vehicular movement modelling at intersections based on optimal control," Transportation Research Part B: Methodological, Elsevier, vol. 138(C), pages 1-22.
    9. Kristine Edgar Danielyan & Samvel Grigoriy Chailyan, 2019. "Delineation of Effectors Impact on The Human Brain Derived Phosphoribosylpyrophosphate Synthetase-1 Activity," Biomedical Journal of Scientific & Technical Research, Biomedical Research Network+, LLC, vol. 24(1), pages 17918-17926, December.
    10. Chuan Wang & Yupeng Liu & Wen Hou & Chao Yu & Guorong Wang & Yuyan Zheng, 2021. "Reliability and availability modeling of Subsea Autonomous High Integrity Pressure Protection System with partial stroke test by Dynamic Bayesian," Journal of Risk and Reliability, , vol. 235(2), pages 268-281, April.
    11. Mohammad AL-Zoubi, 2018. "The Role of Technology, Organization, and Environment Factors in Enterprise Resource Planning Implementation Success in Jordan," International Business Research, Canadian Center of Science and Education, vol. 11(8), pages 48-65, August.
    12. Damgaard, Mette Trier & Nielsen, Helena Skyt, 2018. "Nudging in education," Economics of Education Review, Elsevier, vol. 64(C), pages 313-342.
    13. Nicole D. Sintov & P. Wesley Schultz, 2017. "Adjustable Green Defaults Can Help Make Smart Homes More Sustainable," Sustainability, MDPI, vol. 9(4), pages 1-12, April.
    14. Hwang, ShinYoung & Kim Seongcheol, 2017. "What triggers the use of mIM service provider’s sequel O2O service extensions?," 14th ITS Asia-Pacific Regional Conference, Kyoto 2017: Mapping ICT into Transformation for the Next Information Society 168494, International Telecommunications Society (ITS).
    15. Sana Sadiq & Khadija Anasse & Najib Slimani, 2022. "The impact of mobile phones on high school students: connecting the research dots," Technium Social Sciences Journal, Technium Science, vol. 30(1), pages 252-270, April.
    16. Maude Hasbi & Antoine Dubus, 2019. "Determinants of Mobile Broadband Use in Developing Economies: Evidence from Sub-Saharan Africa," Working Papers hal-02264651, HAL.
    17. Jascha-Alexander Koch & Michael Siering, 2019. "The recipe of successful crowdfunding campaigns," Electronic Markets, Springer;IIM University of St. Gallen, vol. 29(4), pages 661-679, December.
    18. Martins, José & Costa, Catarina & Oliveira, Tiago & Gonçalves, Ramiro & Branco, Frederico, 2019. "How smartphone advertising influences consumers' purchase intention," Journal of Business Research, Elsevier, vol. 94(C), pages 378-387.
    19. Retina Rimal & Chris Papadopoulos, 2016. "The mental health of sexually trafficked female survivors in Nepal," International Journal of Social Psychiatry, , vol. 62(5), pages 487-495, August.
    20. Wu, Bing & Yip, Tsz Leung & Yan, Xinping & Guedes Soares, C., 2022. "Review of techniques and challenges of human and organizational factors analysis in maritime transportation," Reliability Engineering and System Safety, Elsevier, vol. 219(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29016-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.