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AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic

Author

Listed:
  • Tuyet Hoang

    (The University of Melbourne at The Peter Doherty Institute for Infection and Immunity)

  • Anders Gonçalves Silva

    (The University of Melbourne at The Peter Doherty Institute for Infection and Immunity)

  • Amy V. Jennison

    (Public Health Microbiology, Queensland Public Health and Infectious Diseases Reference Genomics (Q-PHIRE Genomics), Forensic and Scientific Services, Queensland Department of Health)

  • Deborah A. Williamson

    (Victorian Infectious Diseases Reference Laboratory, Royal Melbourne Hospital at The Peter Doherty Institute for Infection and Immunity
    Department of Infectious Diseases, University of Melbourne at The Peter Doherty Institute for Infection and Immunity)

  • Benjamin P. Howden

    (The University of Melbourne at The Peter Doherty Institute for Infection and Immunity)

  • Torsten Seemann

    (The University of Melbourne at The Peter Doherty Institute for Infection and Immunity)

Abstract

The COVID-19 pandemic has driven demand for integrated genomics, resulting in fast-tracked development of AusTrakka, Australia’s pathogen genomics platform. This facilitated rapid data sharing, democratised access to computational and bioinformatic resources and expertise, and achieved national real-time genomic surveillance.

Suggested Citation

  • Tuyet Hoang & Anders Gonçalves Silva & Amy V. Jennison & Deborah A. Williamson & Benjamin P. Howden & Torsten Seemann, 2022. "AusTrakka: Fast-tracking nationalized genomics surveillance in response to the COVID-19 pandemic," Nature Communications, Nature, vol. 13(1), pages 1-4, December.
    • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-28529-9
    DOI: 10.1038/s41467-022-28529-9
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    References listed on IDEAS

    as
    1. Torsten Seemann & Courtney R. Lane & Norelle L. Sherry & Sebastian Duchene & Anders Gonçalves da Silva & Leon Caly & Michelle Sait & Susan A. Ballard & Kristy Horan & Mark B. Schultz & Tuyet Hoang & M, 2020. "Tracking the COVID-19 pandemic in Australia using genomics," Nature Communications, Nature, vol. 11(1), pages 1-9, December.
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