IDEAS home Printed from https://ideas.repec.org/a/gam/jijerp/v20y2022i1p701-d1020593.html
   My bibliography  Save this article

Toxicity Rank Order (TRO) As a New Approach for Toxicity Prediction by QSAR Models

Author

Listed:
  • Yuting Chen

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

  • Yuying Dong

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

  • Le Li

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

  • Jian Jiao

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

  • Sitong Liu

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

  • Xuejun Zou

    (College of Environment and Resource, Dalian Minzu University, Dalian 116600, China)

Abstract

Quantitative Structure–Activity Relationship (QSAR) models are commonly used for risk assessment of emerging contaminants. The objective of this study was to use a toxicity rank order (TRO) as an integrating parameter to improve the toxicity prediction by QSAR models. TRO for each contaminant was calculated from collected toxicity data including acute toxicity concentration and no observed effect concentration. TRO values associated with toxicity mechanisms were used to classify pollutants into three modes of action consisting of narcosis, transition and reactivity. The selection principle of parameters for QSAR models was established and verified. It showed a reasonable prediction of toxicities caused by organophosphates and benzene derivatives, especially. Compared with traditional procedures, incorporating TRO showed an improved correlation coefficient of QSAR models by approximately 10%. Our study indicated that the proposed procedure can be used for screening modeling parameter data and improve the toxicity prediction by QSAR models, and this could facilitate prediction and evaluation of environmental contaminant toxicity.

Suggested Citation

  • Yuting Chen & Yuying Dong & Le Li & Jian Jiao & Sitong Liu & Xuejun Zou, 2022. "Toxicity Rank Order (TRO) As a New Approach for Toxicity Prediction by QSAR Models," IJERPH, MDPI, vol. 20(1), pages 1-10, December.
  • Handle: RePEc:gam:jijerp:v:20:y:2022:i:1:p:701-:d:1020593
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/1660-4601/20/1/701/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/1660-4601/20/1/701/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. Zhixing Ren & Yingwei Wang & Haihong Xu & Yufei Li & Song Han, 2019. "Fuzzy Comprehensive Evaluation Assistant 3D-QSAR of Environmentally Friendly FQs to Reduce ADRs," IJERPH, MDPI, vol. 16(17), pages 1-20, August.
    2. Lu-ze Yang & Miao Liu, 2020. "A Double-Activity (Green Algae Toxicity and Bacterial Genotoxicity) 3D-QSAR Model Based on the Comprehensive Index Method and Its Application in Fluoroquinolones’ Modification," IJERPH, MDPI, vol. 17(3), pages 1-14, February.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Yilin Hou & Yuanyuan Zhao & Yu Li, 2020. "Environmentally Friendly Fluoroquinolone Derivatives with Lower Plasma Protein Binding Rate Designed Using 3D-QSAR, Molecular Docking and Molecular Dynamics Simulation," IJERPH, MDPI, vol. 17(18), pages 1-18, September.
    2. Peixuan Sun & Yuanyuan Zhao & Luze Yang & Zhixing Ren & Wenjin Zhao, 2020. "Environmentally Friendly Quinolones Design for a Two-Way Choice between Biotoxicity and Genotoxicity through Double-Activity 3D-QSAR Model Coupled with the Variation Weighting Method," IJERPH, MDPI, vol. 17(24), pages 1-22, December.
    3. Haigang Zhang & Chengji Zhao & Hui Na, 2020. "Enhanced Biodegradation of Phthalic Acid Esters’ Derivatives by Plasticizer-Degrading Bacteria ( Burkholderia cepacia , Archaeoglobus fulgidus , Pseudomonas aeruginosa ) Using a Correction 3D-QSAR Mod," IJERPH, MDPI, vol. 17(15), pages 1-17, July.
    4. Peixuan Sun & Wenjin Zhao, 2021. "Strategies to Control Human Health Risks Arising from Antibiotics in the Environment: Molecular Modification of QNs for Enhanced Plant–Microbial Synergistic Degradation," IJERPH, MDPI, vol. 18(20), pages 1-26, October.
    5. Lu-ze Yang & Miao Liu, 2020. "A Double-Activity (Green Algae Toxicity and Bacterial Genotoxicity) 3D-QSAR Model Based on the Comprehensive Index Method and Its Application in Fluoroquinolones’ Modification," IJERPH, MDPI, vol. 17(3), pages 1-14, February.
    6. Xingyan Jin & Yuanyuan Zhao & Zhixing Ren & Panpan Wang & Yu Li, 2022. "Bio-Enhanced Degradation Strategies for Fluoroquinolones in the Sewage Sludge Composting Stage: Molecular Modification and Resistance Gene Regulation," IJERPH, MDPI, vol. 19(13), pages 1-19, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jijerp:v:20:y:2022:i:1:p:701-:d:1020593. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.