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Assessing Machine Learning-Based Prediction under Different Agricultural Practices for Digital Mapping of Soil Organic Carbon and Available Phosphorus

Author

Listed:
  • Fuat Kaya

    (Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Isparta University of Applied Sciences, Isparta 32260, Türkiye)

  • Ali Keshavarzi

    (Laboratory of Remote Sensing and GIS, Department of Soil Science, University of Tehran, P.O. Box 4111, Karaj 31587-77871, Iran)

  • Rosa Francaviglia

    (Research Centre for Agriculture and Environment, Council for Agricultural Research and Economics, 00184 Rome, Italy)

  • Gordana Kaplan

    (Institute of Earth and Space Sciences, Eskisehir Technical University, Eskisehir 26555, Türkiye)

  • Levent Başayiğit

    (Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Isparta University of Applied Sciences, Isparta 32260, Türkiye)

  • Mert Dedeoğlu

    (Department of Soil Science and Plant Nutrition, Agriculture Faculty, Selçuk University, Konya 42130, Türkiye)

Abstract

Predicting soil chemical properties such as soil organic carbon (SOC) and available phosphorus (Ava-P) content is critical in areas where different land uses exist. The distribution of SOC and Ava-P is influenced by both natural and anthropogenic factors. This study aimed at (1) predicting SOC and Ava-P in a piedmont plain of Northeast Iran using the Random Forests (RF) and Cubist mathematical models and hybrid models (Regression Kriging), (2) comparing the models’ results, and (3) identifying the key variables that influence the spatial dynamics of soil SOC and Ava-P under different agricultural practices. The machine learning models were trained with 201 composite surface soil samples and 24 ancillary data, including climate (C), organism (O), topography- relief (R), parent material (P) and key soil features (S) according to the SCORPAN digital soil mapping framework, which can predictively represent soil formation factors spatially. Clay, one of the most critical soil properties with a well-known relationship to SOC, was the most important predictor of SOC, followed by open-access multispectral satellite images-based vegetation and soil indices. Ava-P had a similar set of effective variables. Hybrid approaches did not improve model accuracy significantly, but they did reduce map uncertainty. In the validation set, Ava-P was calculated using the RF algorithm with a normalized root mean square (NRMSE) of 96.8, while SOC was calculated using the Cubist algorithm with an NRMSE of 94.2. These values did not change when using the hybrid technique for Ava-P; however, they changed just by 1% for SOC. The management of SOC content and the supply of Ava-P in agricultural activities can be guided by SOC and Ava-P digital distribution maps. Produced digital maps in which the soil scientist plays an active role can be used to identify areas where concentrations are high and need to be protected, where uncertainty is high and sampling is required for further monitoring.

Suggested Citation

  • Fuat Kaya & Ali Keshavarzi & Rosa Francaviglia & Gordana Kaplan & Levent Başayiğit & Mert Dedeoğlu, 2022. "Assessing Machine Learning-Based Prediction under Different Agricultural Practices for Digital Mapping of Soil Organic Carbon and Available Phosphorus," Agriculture, MDPI, vol. 12(7), pages 1-27, July.
  • Handle: RePEc:gam:jagris:v:12:y:2022:i:7:p:1062-:d:867249
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    References listed on IDEAS

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    1. Ying-Qiang Song & Lian-An Yang & Bo Li & Yue-Ming Hu & An-Le Wang & Wu Zhou & Xue-Sen Cui & Yi-Lun Liu, 2017. "Spatial Prediction of Soil Organic Matter Using a Hybrid Geostatistical Model of an Extreme Learning Machine and Ordinary Kriging," Sustainability, MDPI, vol. 9(5), pages 1-17, May.
    2. Gérard Biau & Erwan Scornet, 2016. "A random forest guided tour," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(2), pages 197-227, June.
    3. Zihao Wu & Yaolin Liu & Guie Li & Yiran Han & Xiaoshun Li & Yiyun Chen, 2022. "Influences of Environmental Variables and Their Interactions on Chinese Farmland Soil Organic Carbon Density and Its Dynamics," Land, MDPI, vol. 11(2), pages 1-16, January.
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    Cited by:

    1. Lea Piscitelli & Annalisa De Boni & Rocco Roma & Giovanni Ottomano Palmisano, 2023. "Carbon Farming: How to Support Farmers in Choosing the Best Management Strategies for Low-Impact Food Production," Land, MDPI, vol. 13(1), pages 1-16, December.
    2. Xiangjuan Liu & Qiaonan Yang & Rurou Yang & Lin Liu & Xibing Li, 2024. "Corn Yield Prediction Based on Dynamic Integrated Stacked Regression," Agriculture, MDPI, vol. 14(10), pages 1-18, October.
    3. Odunayo David Adeniyi & Hauwa Bature & Michael Mearker, 2024. "A Systematic Review on Digital Soil Mapping Approaches in Lowland Areas," Land, MDPI, vol. 13(3), pages 1-22, March.
    4. Meftah Salem M. Alfatni & Siti Khairunniza-Bejo & Mohammad Hamiruce B. Marhaban & Osama M. Ben Saaed & Aouache Mustapha & Abdul Rashid Mohamed Shariff, 2022. "Towards a Real-Time Oil Palm Fruit Maturity System Using Supervised Classifiers Based on Feature Analysis," Agriculture, MDPI, vol. 12(9), pages 1-28, September.
    5. Dorijan Radočaj & Mateo Gašparović & Mladen Jurišić, 2024. "Open Remote Sensing Data in Digital Soil Organic Carbon Mapping: A Review," Agriculture, MDPI, vol. 14(7), pages 1-19, June.

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