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Lettuce Growth Pattern Analysis Using U-Net Pre-Trained with Arabidopsis

Author

Listed:
  • Sungyul Chang

    (Radiation Breeding Research Team, Advanced Radiation Technology Institute (ARTI), Korea Atomic Energy Research Institute (KAERI), 29 Geumgu-gil, Jeongeup-si 56212, Jeollabuk-do, Korea)

  • Unseok Lee

    (Smart Farm Research Center, Korea Institute of Science and Technology (KIST), 679 Saimdang-ro, Gangneung 210-340, Gangwon-do, Korea)

  • Min Jeong Hong

    (Radiation Breeding Research Team, Advanced Radiation Technology Institute (ARTI), Korea Atomic Energy Research Institute (KAERI), 29 Geumgu-gil, Jeongeup-si 56212, Jeollabuk-do, Korea)

  • Yeong Deuk Jo

    (Radiation Breeding Research Team, Advanced Radiation Technology Institute (ARTI), Korea Atomic Energy Research Institute (KAERI), 29 Geumgu-gil, Jeongeup-si 56212, Jeollabuk-do, Korea)

  • Jin-Baek Kim

    (Radiation Breeding Research Team, Advanced Radiation Technology Institute (ARTI), Korea Atomic Energy Research Institute (KAERI), 29 Geumgu-gil, Jeongeup-si 56212, Jeollabuk-do, Korea)

Abstract

To overcome the challenges related to food security, digital farming has been proposed, wherein the status of a plant using various sensors could be determined in real time. The high-throughput phenotyping platform (HTPP) and analysis with deep learning (DL) are increasingly being used but require a lot of resources. For botanists who have no prior knowledge of DL, the image analysis method is relatively easy to use. Hence, we aimed to explore a pre-trained Arabidopsis DL model to extract the projected area (PA) for lettuce growth pattern analysis. The accuracies of the extract PA of the lettuce cultivar “Nul-chung” with a pre-trained model was measured using the Jaccard Index, and the median value was 0.88 and 0.87 in two environments. Moreover, the growth pattern of green lettuce showed reproducible results in the same environment ( p < 0.05). The pre-trained model successfully extracted the time-series PA of lettuce under two lighting conditions ( p < 0.05), showing the potential application of a pre-trained DL model of target species in the study of traits in non-target species under various environmental conditions. Botanists and farmers would benefit from fewer challenges when applying up-to-date DL in crop analysis when few resources are available for image analysis of a target crop.

Suggested Citation

  • Sungyul Chang & Unseok Lee & Min Jeong Hong & Yeong Deuk Jo & Jin-Baek Kim, 2021. "Lettuce Growth Pattern Analysis Using U-Net Pre-Trained with Arabidopsis," Agriculture, MDPI, vol. 11(9), pages 1-8, September.
  • Handle: RePEc:gam:jagris:v:11:y:2021:i:9:p:890-:d:636720
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    References listed on IDEAS

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    1. Van Henten, E. J., 1994. "Validation of a dynamic lettuce growth model for greenhouse climate control," Agricultural Systems, Elsevier, vol. 45(1), pages 55-72.
    2. Alfons Weersink & Evan Fraser & David Pannell & Emily Duncan & Sarah Rotz, 2018. "Opportunities and Challenges for Big Data in Agricultural and Environmental Analysis," Annual Review of Resource Economics, Annual Reviews, vol. 10(1), pages 19-37, October.
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    1. José-Joel González-Barbosa & Alfonso Ramírez-Pedraza & Francisco-Javier Ornelas-Rodríguez & Diana-Margarita Cordova-Esparza & Erick-Alejandro González-Barbosa, 2022. "Dynamic Measurement of Portos Tomato Seedling Growth Using the Kinect 2.0 Sensor," Agriculture, MDPI, vol. 12(4), pages 1-24, March.
    2. Guk-Jin Son & Dong-Hoon Kwak & Mi-Kyung Park & Young-Duk Kim & Hee-Chul Jung, 2021. "U-Net-Based Foreign Object Detection Method Using Effective Image Acquisition System: A Case of Almond and Green Onion Flake Food Process," Sustainability, MDPI, vol. 13(24), pages 1-20, December.

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