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Allometric scaling of von Neumann entropy in animal connectomes and its evolutionary aspect

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  • Saha, Papri
  • Sarkar, Debasish

Abstract

The ubiquitous scaling relationships may serve as an entry point in understanding the structurofunctional complexities of animal connectomes. One of the possible approaches of framing such a relationship is based on the network’s community structure, where the scaling relation of a complexity measure with the respective community size is investigated. In recent times, the von Neumann entropy, a spectral complexity measure of networks, has found several applications in complex network analysis. In this article, we demonstrate the community-wise scaling attribute of the network von Neumann entropy for six different animal connectomes (p<0.0001, and R2>0.95). The community structures were determined by the well-known modularity maximization technique and subsequently optimized upon tuning the structural resolution parameter that allows the community detection at multiple scales. Interestingly, the allometric scaling exponents were noted to be monotonic with the phylogenetic order of the investigated species.

Suggested Citation

  • Saha, Papri & Sarkar, Debasish, 2022. "Allometric scaling of von Neumann entropy in animal connectomes and its evolutionary aspect," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 600(C).
  • Handle: RePEc:eee:phsmap:v:600:y:2022:i:c:s0378437122003594
    DOI: 10.1016/j.physa.2022.127503
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    1. Shin-ya Takemura & Arjun Bharioke & Zhiyuan Lu & Aljoscha Nern & Shiv Vitaladevuni & Patricia K. Rivlin & William T. Katz & Donald J. Olbris & Stephen M. Plaza & Philip Winston & Ting Zhao & Jane Anne, 2013. "A visual motion detection circuit suggested by Drosophila connectomics," Nature, Nature, vol. 500(7461), pages 175-181, August.
    2. Seung Wook Oh & Julie A. Harris & Lydia Ng & Brent Winslow & Nicholas Cain & Stefan Mihalas & Quanxin Wang & Chris Lau & Leonard Kuan & Alex M. Henry & Marty T. Mortrud & Benjamin Ouellette & Thuc Ngh, 2014. "A mesoscale connectome of the mouse brain," Nature, Nature, vol. 508(7495), pages 207-214, April.
    3. Logan Harriger & Martijn P van den Heuvel & Olaf Sporns, 2012. "Rich Club Organization of Macaque Cerebral Cortex and Its Role in Network Communication," PLOS ONE, Public Library of Science, vol. 7(9), pages 1-13, September.
    4. David G Jenkins & Pedro F Quintana-Ascencio, 2020. "A solution to minimum sample size for regressions," PLOS ONE, Public Library of Science, vol. 15(2), pages 1-15, February.
    5. Wilhelm, Thomas & Hollunder, Jens, 2007. "Information theoretic description of networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 385(1), pages 385-396.
    6. Manlio De Domenico & Vincenzo Nicosia & Alexandre Arenas & Vito Latora, 2015. "Structural reducibility of multilayer networks," Nature Communications, Nature, vol. 6(1), pages 1-9, November.
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