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Bayesian palaeoclimate reconstruction

Author

Listed:
  • J. Haslett
  • M. Whiley
  • S. Bhattacharya
  • M. Salter‐Townshend
  • Simon P. Wilson
  • J. R. M. Allen
  • B. Huntley
  • F. J. G. Mitchell

Abstract

Summary. We consider the problem of reconstructing prehistoric climates by using fossil data that have been extracted from lake sediment cores. Such reconstructions promise to provide one of the few ways to validate modern models of climate change. A hierarchical Bayesian modelling approach is presented and its use, inversely, is demonstrated in a relatively small but statistically challenging exercise: the reconstruction of prehistoric climate at Glendalough in Ireland from fossil pollen. This computationally intensive method extends current approaches by explicitly modelling uncertainty and reconstructing entire climate histories. The statistical issues that are raised relate to the use of compositional data (pollen) with covariates (climate) which are available at many modern sites but are missing for the fossil data. The compositional data arise as mixtures and the missing covariates have a temporal structure. Novel aspects of the analysis include a spatial process model for compositional data, local modelling of lattice data, the use, as a prior, of a random walk with long‐tailed increments, a two‐stage implementation of the Markov chain Monte Carlo approach and a fast approximate procedure for cross‐validation in inverse problems. We present some details, contrasting its reconstructions with those which have been generated by a method in use in the palaeoclimatology literature. We suggest that the method provides a basis for resolving important challenging issues in palaeoclimate research. We draw attention to several challenging statistical issues that need to be overcome.

Suggested Citation

  • J. Haslett & M. Whiley & S. Bhattacharya & M. Salter‐Townshend & Simon P. Wilson & J. R. M. Allen & B. Huntley & F. J. G. Mitchell, 2006. "Bayesian palaeoclimate reconstruction," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 169(3), pages 395-438, July.
  • Handle: RePEc:bla:jorssa:v:169:y:2006:i:3:p:395-438
    DOI: 10.1111/j.1467-985X.2006.00429.x
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    References listed on IDEAS

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    1. Train,Kenneth E., 2009. "Discrete Choice Methods with Simulation," Cambridge Books, Cambridge University Press, number 9780521747387, September.
    2. Billheimer D. & Guttorp P. & Fagan W.F., 2001. "Statistical Interpretation of Species Composition," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1205-1214, December.
    3. Håkon Tjelmeland & Kjetill Vassmo Lund, 2003. "Bayesian modelling of spatial compositional data," Journal of Applied Statistics, Taylor & Francis Journals, vol. 30(1), pages 87-100.
    4. John Haslett & Kevin Hayes, 1998. "Residuals for the linear model with general covariance structure," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 60(1), pages 201-215.
    5. Maarten Blaauw & J. Andrés Christen, 2005. "Radiocarbon peat chronologies and environmental change," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 54(4), pages 805-816, August.
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    Cited by:

    1. Maarten Blaauw & J. Andrés Christen & Marco Antonio Aquino-López, 2020. "A Review of Statistics in Palaeoenvironmental Research," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(1), pages 17-31, March.
    2. Ophélie Guin & Philippe Naveau & Jean-Jacques Boreux, 2018. "Extracting a Common Signal in Tree Ring Widths with a Semi-parametric Bayesian Hierarchical Model," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 23(4), pages 550-565, December.
    3. Hernández, Armand & Sánchez-López, Guiomar & Pla-Rabes, Sergi & Comas-Bru, Laia & Parnell, Andrew & Cahill, Niamh & Geyer, Adelina & Trigo, Ricardo M & Giralt, Santiago, 2019. "A 2,000-year Bayesian NAO reconstruction from the Iberian Peninsula," Earth Arxiv p7ft6, Center for Open Science.
    4. Garreta, V. & Guiot, J. & Mortier, F. & Chadœuf, J. & Hély, C., 2012. "Pollen-based climate reconstruction: Calibration of the vegetation–pollen processes," Ecological Modelling, Elsevier, vol. 235, pages 81-94.

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