IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v76y2020i3p853-862.html
   My bibliography  Save this article

Learning‐based biomarker‐assisted rules for optimized clinical benefit under a risk constraint

Author

Listed:
  • Yanqing Wang
  • Ying‐Qi Zhao
  • Yingye Zheng

Abstract

Novel biomarkers, in combination with currently available clinical information, have been sought to improve clinical decision making in many branches of medicine, including screening, surveillance, and prognosis. Statistical methods are needed to integrate such diverse information to develop targeted interventions that balance benefit and harm. In the specific setting of disease detection, we propose novel approaches to construct a multiple‐marker‐based decision rule by directly optimizing a benefit function, while controlling harm at a maximally tolerable level. These new approaches include plug‐in and direct‐optimization‐based algorithms, and they allow for the construction of both nonparametric and parametric rules. A study of asymptotic properties of the proposed estimators is provided. Simulation results demonstrate good clinical utilities for the resulting decision rules under various scenarios. The methods are applied to a biomarker study in prostate cancer surveillance.

Suggested Citation

  • Yanqing Wang & Ying‐Qi Zhao & Yingye Zheng, 2020. "Learning‐based biomarker‐assisted rules for optimized clinical benefit under a risk constraint," Biometrics, The International Biometric Society, vol. 76(3), pages 853-862, September.
  • Handle: RePEc:bla:biomet:v:76:y:2020:i:3:p:853-862
    DOI: 10.1111/biom.13199
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/biom.13199
    Download Restriction: no

    File URL: https://libkey.io/10.1111/biom.13199?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Yingqi Zhao & Donglin Zeng & A. John Rush & Michael R. Kosorok, 2012. "Estimating Individualized Treatment Rules Using Outcome Weighted Learning," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(499), pages 1106-1118, September.
    2. Yuanjia Wang & Haoda Fu & Donglin Zeng, 2018. "Learning Optimal Personalized Treatment Rules in Consideration of Benefit and Risk: With an Application to Treating Type 2 Diabetes Patients With Insulin Therapies," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 113(521), pages 1-13, January.
    3. Shuai Chen & Lu Tian & Tianxi Cai & Menggang Yu, 2017. "A general statistical framework for subgroup identification and comparative treatment scoring," Biometrics, The International Biometric Society, vol. 73(4), pages 1199-1209, December.
    4. Margaret Sullivan Pepe & Tianxi Cai & Gary Longton, 2006. "Combining Predictors for Classification Using the Area under the Receiver Operating Characteristic Curve," Biometrics, The International Biometric Society, vol. 62(1), pages 221-229, March.
    5. Stuart G. Baker, 2000. "Identifying Combinations of Cancer Markers for Further Study as Triggers of Early Intervention," Biometrics, The International Biometric Society, vol. 56(4), pages 1082-1087, December.
    6. Xin Zhou & Nicole Mayer-Hamblett & Umer Khan & Michael R. Kosorok, 2017. "Residual Weighted Learning for Estimating Individualized Treatment Rules," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(517), pages 169-187, January.
    7. Xin Qiu & Donglin Zeng & Yuanjia Wang, 2018. "Estimation and evaluation of linear individualized treatment rules to guarantee performance," Biometrics, The International Biometric Society, vol. 74(2), pages 517-528, June.
    8. Bartlett, Peter L. & Jordan, Michael I. & McAuliffe, Jon D., 2006. "Convexity, Classification, and Risk Bounds," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 138-156, March.
    9. Luedtke Alexander R. & van der Laan Mark J., 2016. "Optimal Individualized Treatments in Resource-Limited Settings," The International Journal of Biostatistics, De Gruyter, vol. 12(1), pages 283-303, May.
    10. Shuangge Ma & Jian Huang, 2007. "Combining Multiple Markers for Classification Using ROC," Biometrics, The International Biometric Society, vol. 63(3), pages 751-757, September.
    11. Martin W. McIntosh & Margaret Sullivan Pepe, 2002. "Combining Several Screening Tests: Optimality of the Risk Score," Biometrics, The International Biometric Society, vol. 58(3), pages 657-664, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Yanqing Wang & Yingqi Zhao & Yingye Zheng, 2022. "Targeted Search for Individualized Clinical Decision Rules to Optimize Clinical Outcomes," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 14(3), pages 564-581, December.
    2. Xinyang Huang & Jin Xu, 2020. "Estimating individualized treatment rules with risk constraint," Biometrics, The International Biometric Society, vol. 76(4), pages 1310-1318, December.
    3. Zhen Li & Jie Chen & Eric Laber & Fang Liu & Richard Baumgartner, 2023. "Optimal Treatment Regimes: A Review and Empirical Comparison," International Statistical Review, International Statistical Institute, vol. 91(3), pages 427-463, December.
    4. Carol Y. Lin & Lance A. Waller & Robert H. Lyles, 2012. "The likelihood approach for the comparison of medical diagnostic system with multiple binary tests," Journal of Applied Statistics, Taylor & Francis Journals, vol. 39(7), pages 1437-1454, December.
    5. Chen, Xiwei & Vexler, Albert & Markatou, Marianthi, 2015. "Empirical likelihood ratio confidence interval estimation of best linear combinations of biomarkers," Computational Statistics & Data Analysis, Elsevier, vol. 82(C), pages 186-198.
    6. Weibin Mo & Yufeng Liu, 2022. "Efficient learning of optimal individualized treatment rules for heteroscedastic or misspecified treatment‐free effect models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 84(2), pages 440-472, April.
    7. Osamu Komori, 2011. "A boosting method for maximization of the area under the ROC curve," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 63(5), pages 961-979, October.
    8. Andrew Bennett & Nathan Kallus, 2020. "Efficient Policy Learning from Surrogate-Loss Classification Reductions," Papers 2002.05153, arXiv.org.
    9. Binbing Yu, 2009. "Approximating the risk score for disease diagnosis using MARS," Journal of Applied Statistics, Taylor & Francis Journals, vol. 36(7), pages 769-778.
    10. Qing Lu & Nancy Obuchowski & Sungho Won & Xiaofeng Zhu & Robert C. Elston, 2010. "Using the Optimal Robust Receiver Operating Characteristic (ROC) Curve for Predictive Genetic Tests," Biometrics, The International Biometric Society, vol. 66(2), pages 586-593, June.
    11. Yuxin Zhu & Mei‐Cheng Wang, 2022. "Obtaining optimal cutoff values for tree classifiers using multiple biomarkers," Biometrics, The International Biometric Society, vol. 78(1), pages 128-140, March.
    12. Chiang, Chin-Tsang & Chiu, Chih-Heng, 2012. "Nonparametric and semiparametric optimal transformations of markers," Journal of Multivariate Analysis, Elsevier, vol. 103(1), pages 124-141, January.
    13. Zhang Zhiwei & Ma Shujie & Nie Lei & Soon Guoxing, 2017. "A Quantitative Concordance Measure for Comparing and Combining Treatment Selection Markers," The International Journal of Biostatistics, De Gruyter, vol. 13(1), pages 1-24, May.
    14. Q. Clairon & R. Henderson & N. J. Young & E. D. Wilson & C. J. Taylor, 2021. "Adaptive treatment and robust control," Biometrics, The International Biometric Society, vol. 77(1), pages 223-236, March.
    15. Daniel J. Luckett & Eric B. Laber & Samer S. El‐Kamary & Cheng Fan & Ravi Jhaveri & Charles M. Perou & Fatma M. Shebl & Michael R. Kosorok, 2021. "Receiver operating characteristic curves and confidence bands for support vector machines," Biometrics, The International Biometric Society, vol. 77(4), pages 1422-1430, December.
    16. Zhengyuan Zhou & Susan Athey & Stefan Wager, 2023. "Offline Multi-Action Policy Learning: Generalization and Optimization," Operations Research, INFORMS, vol. 71(1), pages 148-183, January.
    17. Margaret Sullivan Pepe & Tianxi Cai & Gary Longton, 2006. "Combining Predictors for Classification Using the Area under the Receiver Operating Characteristic Curve," Biometrics, The International Biometric Society, vol. 62(1), pages 221-229, March.
    18. Debashis Ghosh, 2004. "Semiparametric methods for the binormal model with multiple biomarkers," The University of Michigan Department of Biostatistics Working Paper Series 1046, Berkeley Electronic Press.
    19. Crystal T. Nguyen & Daniel J. Luckett & Anna R. Kahkoska & Grace E. Shearrer & Donna Spruijt‐Metz & Jaimie N. Davis & Michael R. Kosorok, 2020. "Estimating individualized treatment regimes from crossover designs," Biometrics, The International Biometric Society, vol. 76(3), pages 778-788, September.
    20. Xin Huang & Gengsheng Qin & Yixin Fang, 2011. "Optimal Combinations of Diagnostic Tests Based on AUC," Biometrics, The International Biometric Society, vol. 67(2), pages 568-576, June.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:76:y:2020:i:3:p:853-862. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.