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Shrinkage priors for Bayesian penalized regression

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  • van Erp, Sara

    (Tilburg University)

  • Oberski, Daniel L.
  • Mulder, Joris

Abstract

In linear regression problems with many predictors, penalized regression techniques are often used to guard against overfitting and to select variables relevant for predicting the outcome. Classical regression techniques find coefficients that minimize a squared residual; penalized regression adds a penalty term to this residual to limit the coefficients’ sizes, thereby preventing over- fitting. Many classical penalization techniques have a Bayesian counterpart, which result in the same solutions when a specific prior distribution is used in combination with posterior mode estimates. Compared to classical penalization techniques, the Bayesian penalization techniques perform similarly or even better, and they offer additional advantages such as readily available uncertainty estimates, automatic estimation of the penalty parameter, and more flexibility in terms of penalties that can be considered. As a result, Bayesian penalization is becoming increasingly popular. The aim of this paper is to provide a comprehensive overview of the literature on Bayesian penalization. We will compare different priors for penalization that have been proposed in the literature in terms of their characteristics, shrinkage behavior, and performance in terms of prediction and variable selection in order to aid researchers to navigate the many prior options.

Suggested Citation

  • van Erp, Sara & Oberski, Daniel L. & Mulder, Joris, 2018. "Shrinkage priors for Bayesian penalized regression," OSF Preprints cg8fq_v1, Center for Open Science.
  • Handle: RePEc:osf:osfxxx:cg8fq_v1
    DOI: 10.31219/osf.io/cg8fq_v1
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    1. Redmond, Michael & Baveja, Alok, 2002. "A data-driven software tool for enabling cooperative information sharing among police departments," European Journal of Operational Research, Elsevier, vol. 141(3), pages 660-678, September.
    2. P. Richard Hahn & Carlos M. Carvalho, 2015. "Decoupling Shrinkage and Selection in Bayesian Linear Models: A Posterior Summary Perspective," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(509), pages 435-448, March.
    3. Chris Hans, 2009. "Bayesian lasso regression," Biometrika, Biometrika Trust, vol. 96(4), pages 835-845.
    4. Robert Tibshirani, 2011. "Regression shrinkage and selection via the lasso: a retrospective," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 73(3), pages 273-282, June.
    5. Feng, Xiang-Nan & Wang, Yifan & Lu, Bin & Song, Xin-Yuan, 2017. "Bayesian regularized quantile structural equation models," Journal of Multivariate Analysis, Elsevier, vol. 154(C), pages 234-248.
    6. Ming Yuan & Yi Lin, 2006. "Model selection and estimation in regression with grouped variables," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 68(1), pages 49-67, February.
    7. Carlos M. Carvalho & Nicholas G. Polson & James G. Scott, 2010. "The horseshoe estimator for sparse signals," Biometrika, Biometrika Trust, vol. 97(2), pages 465-480.
    8. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    9. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    10. Friedman, Jerome H. & Hastie, Trevor & Tibshirani, Rob, 2010. "Regularization Paths for Generalized Linear Models via Coordinate Descent," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i01).
    11. Hui Zou & Trevor Hastie, 2005. "Addendum: Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(5), pages 768-768, November.
    12. Hui Zou & Trevor Hastie, 2005. "Regularization and variable selection via the elastic net," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(2), pages 301-320, April.
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