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PROFHAP: Stata module to construct profile likelihood confidence intervals for haplotype analysis

Author

Listed:
  • Adrian Mander

Programming Language

Stata

Abstract

This command fits a series of haplotype association models for various values of the odds ratio. Given the significance level and the chi-squared distribution the confidence upper and lower bounds are estimated. This procedure does not assume that the estimated weights from the EM algorithm to resolve phase are the "true" weights and will give the correct confidence interval.

Suggested Citation

  • Adrian Mander, 2004. "PROFHAP: Stata module to construct profile likelihood confidence intervals for haplotype analysis," Statistical Software Components S447701, Boston College Department of Economics, revised 25 Mar 2005.
    • Handle: RePEc:boc:bocode:s447701
    Note: This module should be installed from within Stata by typing "ssc install profhap". The module is made available under terms of the GPL v3 (https://www.gnu.org/licenses/gpl-3.0.txt). Windows users should not attempt to download these files with a web browser.
    as

    Download full text from publisher

    File URL: http://fmwww.bc.edu/repec/bocode/p/profhap.ado
    File Function: program code
    Download Restriction: no
    File URL: http://fmwww.bc.edu/repec/bocode/p/profhap.hlp
    File Function: help file
    Download Restriction: no
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