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Gaussian Asymptotic Limits for the α-transformation in the Analysis of Compositional Data

Author

Listed:
  • Yannis Pantazis

    (Foundation for Research and Technology - Hellas)

  • Michail Tsagris

    (University of Crete)

  • Andrew T. A. Wood

    (University of Nottingham)

Abstract

Compositional data consists of vectors of proportions whose components sum to 1. Such vectors lie in the standard simplex, which is a manifold with boundary. One issue that has been rather controversial within the field of compositional data analysis is the choice of metric on the simplex. One popular possibility has been to use the metric implied by log-transforming the data, as proposed by Aitchison (Biometrika70, 57–65, 1983, 1986) and another popular approach has been to use the standard Euclidean metric inherited from the ambient space. Tsagris et al. (2011) proposed a one-parameter family of power transformations, the α-transformations, which include both the metric implied by Aitchison’s transformation and the Euclidean metric as particular cases. Our underlying philosophy is that, with many datasets, it may make sense to use the data to help us determine a suitable metric. A related possibility is to apply the α-transformations to a parametric family of distributions, and then estimate α along with the other parameters. However, as we shall see, when one follows this last approach with the Dirichlet family, some care is needed in a certain limiting case which arises (α → 0), as we found out when fitting this model to real and simulated data. Specifically, when the maximum likelihood estimator of α is close to 0, the other parameters tend to be large. The main purpose of the paper is to study this limiting case both theoretically and numerically and to provide insight into these numerical findings.

Suggested Citation

  • Yannis Pantazis & Michail Tsagris & Andrew T. A. Wood, 2019. "Gaussian Asymptotic Limits for the α-transformation in the Analysis of Compositional Data," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 81(1), pages 63-82, February.
    • Handle: RePEc:spr:sankha:v:81:y:2019:i:1:d:10.1007_s13171-018-00160-1
    DOI: 10.1007/s13171-018-00160-1
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    References listed on IDEAS

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    1. Tsagris, Michail & Preston, Simon & T.A. Wood, Andrew, 2016. "Improved classi cation for compositional data using the $\alpha$-transformation," MPRA Paper 67657, University Library of Munich, Germany.
    2. T. Tsagris, Michail & Preston, Simon & T.A. Wood, Andrew, 2011. "A data-based power transformation for compositional data," MPRA Paper 53068, University Library of Munich, Germany.
    3. Michail Tsagris & Simon Preston & Andrew T. A. Wood, 2016. "Improved Classification for Compositional Data Using the α-transformation," Journal of Classification, Springer;The Classification Society, vol. 33(2), pages 243-261, July.
    4. T. Hotz & S. Huckemann, 2015. "Intrinsic means on the circle: uniqueness, locus and asymptotics," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 67(1), pages 177-193, February.
    5. M. J. Baxter, 1995. "Standardization and Transformation in Principal Component Analysis, with Applications to Archaeometry," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 44(4), pages 513-527, December.
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