IDEAS home Printed from https://ideas.repec.org/a/plo/pone00/0085204.html
   My bibliography  Save this article

Deconvolution of Serum Cortisol Levels by Using Compressed Sensing

Author

Listed:
  • Rose T Faghih
  • Munther A Dahleh
  • Gail K Adler
  • Elizabeth B Klerman
  • Emery N Brown

Abstract

The pulsatile release of cortisol from the adrenal glands is controlled by a hierarchical system that involves corticotropin releasing hormone (CRH) from the hypothalamus, adrenocorticotropin hormone (ACTH) from the pituitary, and cortisol from the adrenal glands. Determining the number, timing, and amplitude of the cortisol secretory events and recovering the infusion and clearance rates from serial measurements of serum cortisol levels is a challenging problem. Despite many years of work on this problem, a complete satisfactory solution has been elusive. We formulate this question as a non-convex optimization problem, and solve it using a coordinate descent algorithm that has a principled combination of (i) compressed sensing for recovering the amplitude and timing of the secretory events, and (ii) generalized cross validation for choosing the regularization parameter. Using only the observed serum cortisol levels, we model cortisol secretion from the adrenal glands using a second-order linear differential equation with pulsatile inputs that represent cortisol pulses released in response to pulses of ACTH. Using our algorithm and the assumption that the number of pulses is between 15 to 22 pulses over 24 hours, we successfully deconvolve both simulated datasets and actual 24-hr serum cortisol datasets sampled every 10 minutes from 10 healthy women. Assuming a one-minute resolution for the secretory events, we obtain physiologically plausible timings and amplitudes of each cortisol secretory event with R2 above 0.92. Identification of the amplitude and timing of pulsatile hormone release allows (i) quantifying of normal and abnormal secretion patterns towards the goal of understanding pathological neuroendocrine states, and (ii) potentially designing optimal approaches for treating hormonal disorders.

Suggested Citation

  • Rose T Faghih & Munther A Dahleh & Gail K Adler & Elizabeth B Klerman & Emery N Brown, 2014. "Deconvolution of Serum Cortisol Levels by Using Compressed Sensing," PLOS ONE, Public Library of Science, vol. 9(1), pages 1-12, January.
  • Handle: RePEc:plo:pone00:0085204
    DOI: 10.1371/journal.pone.0085204
    as

    Download full text from publisher

    File URL: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0085204
    Download Restriction: no

    File URL: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0085204&type=printable
    Download Restriction: no

    File URL: https://libkey.io/10.1371/journal.pone.0085204?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Timothy D. Johnson, 2003. "Bayesian Deconvolution Analysis of Pulsatile Hormone Concentration Profiles," Biometrics, The International Biometric Society, vol. 59(3), pages 650-660, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Nichole E. Carlson & Timothy D. Johnson & Morton B. Brown, 2009. "A Bayesian Approach to Modeling Associations Between Pulsatile Hormones," Biometrics, The International Biometric Society, vol. 65(2), pages 650-659, June.
    2. J. Andrés Christen & Bruno Sansó & Mario Santana-Cibrian & Jorge X. Velasco-Hernández, 2016. "Bayesian deconvolution of oil well test data using Gaussian processes," Journal of Applied Statistics, Taylor & Francis Journals, vol. 43(4), pages 721-737, March.
    3. Anna Liu & Yuedong Wang, 2007. "Modeling of Hormone Secretion-Generating Mechanisms with Splines: A Pseudo-Likelihood Approach," Biometrics, The International Biometric Society, vol. 63(1), pages 201-208, March.
    4. Yu-Chieh Yang & Anna Liu & Yuedong Wang, 2006. "Detecting Pulsatile Hormone Secretions Using Nonlinear Mixed Effects Partial Spline Models," Biometrics, The International Biometric Society, vol. 62(1), pages 230-238, March.
    5. Timothy D. Johnson, 2007. "Analysis of Pulsatile Hormone Concentration Profiles with Nonconstant Basal Concentration: A Bayesian Approach," Biometrics, The International Biometric Society, vol. 63(4), pages 1207-1217, December.
    6. Huayu Liu & Nichole E. Carlson & Gary K. Grunwald & Alex J. Polotsky, 2018. "Modeling associations between latent event processes governing time series of pulsing hormones," Biometrics, The International Biometric Society, vol. 74(2), pages 714-724, June.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:plo:pone00:0085204. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: plosone (email available below). General contact details of provider: https://journals.plos.org/plosone/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.