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Deep-Time Phylogenetic Clustering of Extinctions in an Evolutionarily Dynamic Clade (Early Jurassic Ammonites)

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  • Clotilde Hardy
  • Emmanuel Fara
  • Rémi Laffont
  • Jean-Louis Dommergues
  • Christian Meister
  • Pascal Neige

Abstract

Conservation biologists and palaeontologists are increasingly investigating the phylogenetic distribution of extinctions and its evolutionary consequences. However, the dearth of palaeontological studies on that subject and the lack of methodological consensus hamper our understanding of that major evolutionary phenomenon. Here we address this issue by (i) reviewing the approaches used to quantify the phylogenetic selectivity of extinctions and extinction risks; (ii) investigating with a high-resolution dataset whether extinctions and survivals were phylogenetically clustered among early Pliensbachian (Early Jurassic) ammonites; (iii) exploring the phylogenetic and temporal maintenance of this signal. We found that ammonite extinctions were significantly clumped phylogenetically, a pattern that prevailed throughout the 6.6 Myr-long early Pliensbachian interval. Such a phylogenetic conservatism did not alter – or may even have promoted – the evolutionary success of this major cephalopod clade. However, the comparison of phylogenetic autocorrelation among studies remains problematic because the notion of phylogenetic conservatism is scale-dependent and the intensity of the signal is sensitive to temporal resolution. We recommend a combined use of Moran's I, Pearson's φ and Fritz and Purvis' D statistics because they highlight different facets of the phylogenetic pattern of extinctions and/or survivals.

Suggested Citation

  • Clotilde Hardy & Emmanuel Fara & Rémi Laffont & Jean-Louis Dommergues & Christian Meister & Pascal Neige, 2012. "Deep-Time Phylogenetic Clustering of Extinctions in an Evolutionarily Dynamic Clade (Early Jurassic Ammonites)," PLOS ONE, Public Library of Science, vol. 7(5), pages 1-7, May.
  • Handle: RePEc:plo:pone00:0037977
    DOI: 10.1371/journal.pone.0037977
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    References listed on IDEAS

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    1. Rakesh K Parhar & Arne Ø Mooers, 2011. "Phylogenetically Clustered Extinction Risks Do Not Substantially Prune the Tree of Life," PLOS ONE, Public Library of Science, vol. 6(8), pages 1-8, August.
    2. Pavoine, Sandrine & Ollier, Sébastien & Pontier, Dominique & Chessel, Daniel, 2008. "Testing for phylogenetic signal in phenotypic traits: New matrices of phylogenetic proximities," Theoretical Population Biology, Elsevier, vol. 73(1), pages 79-91.
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