MAUI (MBI Analysis User Interface)—An image processing pipeline for Multiplexed Mass Based Imaging
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Abstract
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DOI: 10.1371/journal.pcbi.1008887
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Cited by:
- Yael Amitay & Yuval Bussi & Ben Feinstein & Shai Bagon & Idan Milo & Leeat Keren, 2023. "CellSighter: a neural network to classify cells in highly multiplexed images," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
- Peng Lu & Karolyn A. Oetjen & Diane E. Bender & Marianna B. Ruzinova & Daniel A. C. Fisher & Kevin G. Shim & Russell K. Pachynski & W. Nathaniel Brennen & Stephen T. Oh & Daniel C. Link & Daniel L. J., 2023. "IMC-Denoise: a content aware denoising pipeline to enhance Imaging Mass Cytometry," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
- Muhammad Shaban & Yunhao Bai & Huaying Qiu & Shulin Mao & Jason Yeung & Yao Yu Yeo & Vignesh Shanmugam & Han Chen & Bokai Zhu & Jason L. Weirather & Garry P. Nolan & Margaret A. Shipp & Scott J. Rodig, 2024. "MAPS: pathologist-level cell type annotation from tissue images through machine learning," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
- Thomas Hu & Mayar Allam & Shuangyi Cai & Walter Henderson & Brian Yueh & Aybuke Garipcan & Anton V. Ievlev & Maryam Afkarian & Semir Beyaz & Ahmet F. Coskun, 2023. "Single-cell spatial metabolomics with cell-type specific protein profiling for tissue systems biology," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
- Candace C. Liu & Noah F. Greenwald & Alex Kong & Erin F. McCaffrey & Ke Xuan Leow & Dunja Mrdjen & Bryan J. Cannon & Josef Lorenz Rumberger & Sricharan Reddy Varra & Michael Angelo, 2023. "Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
- Yunhao Bai & Bokai Zhu & John-Paul Oliveria & Bryan J. Cannon & Dorien Feyaerts & Marc Bosse & Kausalia Vijayaragavan & Noah F. Greenwald & Darci Phillips & Christian M. Schürch & Samuel M. Naik & Edw, 2023. "Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
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