Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships
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DOI: 10.1371/journal.pcbi.1008724
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Cited by:
- Niek F. de Jonge & Joris J. R. Louwen & Elena Chekmeneva & Stephane Camuzeaux & Femke J. Vermeir & Robert S. Jansen & Florian Huber & Justin J. J. van der Hooft, 2023. "MS2Query: reliable and scalable MS2 mass spectra-based analogue search," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
- Nicholas J. Morehouse & Trevor N. Clark & Emily J. McMann & Jeffrey A. Santen & F. P. Jake Haeckl & Christopher A. Gray & Roger G. Linington, 2023. "Annotation of natural product compound families using molecular networking topology and structural similarity fingerprinting," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
- Daniel G. C. Treen & Mingxun Wang & Shipei Xing & Katherine B. Louie & Tao Huan & Pieter C. Dorrestein & Trent R. Northen & Benjamin P. Bowen, 2022. "SIMILE enables alignment of tandem mass spectra with statistical significance," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
- Zhiwei Zhou & Mingdu Luo & Haosong Zhang & Yandong Yin & Yuping Cai & Zheng-Jiang Zhu, 2022. "Metabolite annotation from knowns to unknowns through knowledge-guided multi-layer metabolic networking," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
- Qiong Yang & Hongchao Ji & Zhenbo Xu & Yiming Li & Pingshan Wang & Jinyu Sun & Xiaqiong Fan & Hailiang Zhang & Hongmei Lu & Zhimin Zhang, 2023. "Ultra-fast and accurate electron ionization mass spectrum matching for compound identification with million-scale in-silico library," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
- Wout Bittremieux & Nicole E. Avalon & Sydney P. Thomas & Sarvar A. Kakhkhorov & Alexander A. Aksenov & Paulo Wender P. Gomes & Christine M. Aceves & Andrés Mauricio Caraballo-Rodríguez & Julia M. Gaug, 2023. "Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
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