MS2Query: reliable and scalable MS2 mass spectra-based analogue search
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-023-37446-4
Download full text from publisher
References listed on IDEAS
- Florian Huber & Lars Ridder & Stefan Verhoeven & Jurriaan H Spaaks & Faruk Diblen & Simon Rogers & Justin J J van der Hooft, 2021. "Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships," PLOS Computational Biology, Public Library of Science, vol. 17(2), pages 1-18, February.
- Boran Kartal & Wouter J. Maalcke & Naomi M. de Almeida & Irina Cirpus & Jolein Gloerich & Wim Geerts & Huub J. M. Op den Camp & Harry R. Harhangi & Eva M. Janssen-Megens & Kees-Jan Francoijs & Hendrik, 2011. "Molecular mechanism of anaerobic ammonium oxidation," Nature, Nature, vol. 479(7371), pages 127-130, November.
- Robert S. Jansen & Lungelo Mandyoli & Ryan Hughes & Shoko Wakabayashi & Jessica T. Pinkham & Bruna Selbach & Kristine M. Guinn & Eric J. Rubin & James C. Sacchettini & Kyu Y. Rhee, 2020. "Aspartate aminotransferase Rv3722c governs aspartate-dependent nitrogen metabolism in Mycobacterium tuberculosis," Nature Communications, Nature, vol. 11(1), pages 1-13, December.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Beiying Li & Conghe Liu & Jingjing Bai & Yikun Huang & Run Su & Yan Wei & Bin Ma, 2024. "Strategy to mitigate substrate inhibition in wastewater treatment systems," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
- Wout Bittremieux & Nicole E. Avalon & Sydney P. Thomas & Sarvar A. Kakhkhorov & Alexander A. Aksenov & Paulo Wender P. Gomes & Christine M. Aceves & Andrés Mauricio Caraballo-Rodríguez & Julia M. Gaug, 2023. "Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
- Nicholas J. Morehouse & Trevor N. Clark & Emily J. McMann & Jeffrey A. Santen & F. P. Jake Haeckl & Christopher A. Gray & Roger G. Linington, 2023. "Annotation of natural product compound families using molecular networking topology and structural similarity fingerprinting," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
- Ying-Li Zhou & Paraskevi Mara & Guo-Jie Cui & Virginia P. Edgcomb & Yong Wang, 2022. "Microbiomes in the Challenger Deep slope and bottom-axis sediments," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
- Yuan Wei & Yue Jin & Wenjie Zhang, 2020. "Domestic Sewage Treatment Using a One-Stage ANAMMOX Process," IJERPH, MDPI, vol. 17(9), pages 1-14, May.
- Daniel G. C. Treen & Mingxun Wang & Shipei Xing & Katherine B. Louie & Tao Huan & Pieter C. Dorrestein & Trent R. Northen & Benjamin P. Bowen, 2022. "SIMILE enables alignment of tandem mass spectra with statistical significance," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
- Qiong Yang & Hongchao Ji & Zhenbo Xu & Yiming Li & Pingshan Wang & Jinyu Sun & Xiaqiong Fan & Hailiang Zhang & Hongmei Lu & Zhimin Zhang, 2023. "Ultra-fast and accurate electron ionization mass spectrum matching for compound identification with million-scale in-silico library," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
- Zhiwei Zhou & Mingdu Luo & Haosong Zhang & Yandong Yin & Yuping Cai & Zheng-Jiang Zhu, 2022. "Metabolite annotation from knowns to unknowns through knowledge-guided multi-layer metabolic networking," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-37446-4. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.