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MeCP2 links heterochromatin condensates and neurodevelopmental disease

Author

Listed:
  • Charles H. Li

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

  • Eliot L. Coffey

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

  • Alessandra Dall’Agnese

    (Whitehead Institute for Biomedical Research)

  • Nancy M. Hannett

    (Whitehead Institute for Biomedical Research)

  • Xin Tang

    (Whitehead Institute for Biomedical Research)

  • Jonathan E. Henninger

    (Whitehead Institute for Biomedical Research)

  • Jesse M. Platt

    (Whitehead Institute for Biomedical Research
    Massachusetts General Hospital)

  • Ozgur Oksuz

    (Whitehead Institute for Biomedical Research)

  • Alicia V. Zamudio

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

  • Lena K. Afeyan

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

  • Jurian Schuijers

    (Whitehead Institute for Biomedical Research
    University Medical Center Utrecht)

  • X. Shawn Liu

    (Whitehead Institute for Biomedical Research
    Columbia University Medical Center)

  • Styliani Markoulaki

    (Whitehead Institute for Biomedical Research)

  • Tenzin Lungjangwa

    (Whitehead Institute for Biomedical Research)

  • Gary LeRoy

    (New York University School of Medicine)

  • Devon S. Svoboda

    (Whitehead Institute for Biomedical Research)

  • Emile Wogram

    (Whitehead Institute for Biomedical Research)

  • Tong Ihn Lee

    (Whitehead Institute for Biomedical Research)

  • Rudolf Jaenisch

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

  • Richard A. Young

    (Whitehead Institute for Biomedical Research
    Massachusetts Institute of Technology)

Abstract

Methyl CpG binding protein 2 (MeCP2) is a key component of constitutive heterochromatin, which is crucial for chromosome maintenance and transcriptional silencing1–3. Mutations in the MECP2 gene cause the progressive neurodevelopmental disorder Rett syndrome3–5, which is associated with severe mental disability and autism-like symptoms that affect girls during early childhood. Although previously thought to be a dense and relatively static structure1,2, heterochromatin is now understood to exhibit properties consistent with a liquid-like condensate6,7. Here we show that MeCP2 is a dynamic component of heterochromatin condensates in cells, and is stimulated by DNA to form liquid-like condensates. MeCP2 contains several domains that contribute to the formation of condensates, and mutations in MECP2 that lead to Rett syndrome disrupt the ability of MeCP2 to form condensates. Condensates formed by MeCP2 selectively incorporate and concentrate heterochromatin cofactors rather than components of euchromatic transcriptionally active condensates. We propose that MeCP2 enhances the separation of heterochromatin and euchromatin through its condensate partitioning properties, and that disruption of condensates may be a common consequence of mutations in MeCP2 that cause Rett syndrome.

Suggested Citation

  • Charles H. Li & Eliot L. Coffey & Alessandra Dall’Agnese & Nancy M. Hannett & Xin Tang & Jonathan E. Henninger & Jesse M. Platt & Ozgur Oksuz & Alicia V. Zamudio & Lena K. Afeyan & Jurian Schuijers & , 2020. "MeCP2 links heterochromatin condensates and neurodevelopmental disease," Nature, Nature, vol. 586(7829), pages 440-444, October.
  • Handle: RePEc:nat:nature:v:586:y:2020:i:7829:d:10.1038_s41586-020-2574-4
    DOI: 10.1038/s41586-020-2574-4
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    Citations

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    Cited by:

    1. Naohiro Kuwayama & Tomoya Kujirai & Yusuke Kishi & Rina Hirano & Kenta Echigoya & Lingyan Fang & Sugiko Watanabe & Mitsuyoshi Nakao & Yutaka Suzuki & Kei-ichiro Ishiguro & Hitoshi Kurumizaka & Yukiko , 2023. "HMGA2 directly mediates chromatin condensation in association with neuronal fate regulation," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    2. Jun Sun & Jiale Qu & Cai Zhao & Xinyao Zhang & Xinyu Liu & Jia Wang & Chao Wei & Xinyi Liu & Mulan Wang & Pengguihang Zeng & Xiuxiao Tang & Xiaoru Ling & Li Qing & Shaoshuai Jiang & Jiahao Chen & Tara, 2024. "Precise prediction of phase-separation key residues by machine learning," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    3. Dongdong Qin & Yayun Gu & Yu Zhang & Shu Wang & Tao Jiang & Yao Wang & Cheng Wang & Chang Chen & Tao Zhang & Weiya Xu & Hanben Wang & Ke Zhang & Liangjun Hu & Lufan Li & Wei Xie & Xin Wu & Zhibin Hu, 2023. "Phase-separated CCER1 coordinates the histone-to-protamine transition and male fertility," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    4. Hui Wang & Boyuan Li & Linyu Zuo & Bo Wang & Yan Yan & Kai Tian & Rong Zhou & Chenlu Wang & Xizi Chen & Yongpeng Jiang & Haonan Zheng & Fangfei Qin & Bin Zhang & Yang Yu & Chao-Pei Liu & Yanhui Xu & J, 2022. "The transcriptional coactivator RUVBL2 regulates Pol II clustering with diverse transcription factors," Nature Communications, Nature, vol. 13(1), pages 1-26, December.
    5. Raphaël Pantier & Megan Brown & Sicheng Han & Katie Paton & Stephen Meek & Thomas Montavon & Nicholas Shukeir & Toni McHugh & David A. Kelly & Tino Hochepied & Claude Libert & Thomas Jenuwein & Tom Bu, 2024. "MeCP2 binds to methylated DNA independently of phase separation and heterochromatin organisation," Nature Communications, Nature, vol. 15(1), pages 1-14, December.

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