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Cyclic GMP–AMP signalling protects bacteria against viral infection

Author

Listed:
  • Daniel Cohen

    (Weizmann Institute of Science)

  • Sarah Melamed

    (Weizmann Institute of Science)

  • Adi Millman

    (Weizmann Institute of Science)

  • Gabriela Shulman

    (Weizmann Institute of Science)

  • Yaara Oppenheimer-Shaanan

    (Weizmann Institute of Science)

  • Assaf Kacen

    (Weizmann Institute of Science)

  • Shany Doron

    (Weizmann Institute of Science)

  • Gil Amitai

    (Weizmann Institute of Science)

  • Rotem Sorek

    (Weizmann Institute of Science)

Abstract

The cyclic GMP–AMP synthase (cGAS)–STING pathway is a central component of the cell-autonomous innate immune system in animals1,2. The cGAS protein is a sensor of cytosolic viral DNA and, upon sensing DNA, it produces a cyclic GMP–AMP (cGAMP) signalling molecule that binds to the STING protein and activates the immune response3–5. The production of cGAMP has also been detected in bacteria6, and has been shown, in Vibrio cholerae, to activate a phospholipase that degrades the inner bacterial membrane7. However, the biological role of cGAMP signalling in bacteria remains unknown. Here we show that cGAMP signalling is part of an antiphage defence system that is common in bacteria. This system is composed of a four-gene operon that encodes the bacterial cGAS and the associated phospholipase, as well as two enzymes with the eukaryotic-like domains E1, E2 and JAB. We show that this operon confers resistance against a wide variety of phages. Phage infection triggers the production of cGAMP, which—in turn—activates the phospholipase, leading to a loss of membrane integrity and to cell death before completion of phage reproduction. Diverged versions of this system appear in more than 10% of prokaryotic genomes, and we show that variants with effectors other than phospholipase also protect against phage infection. Our results suggest that the eukaryotic cGAS–STING antiviral pathway has ancient evolutionary roots that stem from microbial defences against phages.

Suggested Citation

  • Daniel Cohen & Sarah Melamed & Adi Millman & Gabriela Shulman & Yaara Oppenheimer-Shaanan & Assaf Kacen & Shany Doron & Gil Amitai & Rotem Sorek, 2019. "Cyclic GMP–AMP signalling protects bacteria against viral infection," Nature, Nature, vol. 574(7780), pages 691-695, October.
  • Handle: RePEc:nat:nature:v:574:y:2019:i:7780:d:10.1038_s41586-019-1605-5
    DOI: 10.1038/s41586-019-1605-5
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    Citations

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    Cited by:

    1. Tzu-Ping Ko & Yu-Chuan Wang & Chia-Shin Yang & Mei-Hui Hou & Chao-Jung Chen & Yi-Fang Chiu & Yeh Chen, 2022. "Crystal structure and functional implication of bacterial STING," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
    2. Chia-Shin Yang & Tzu-Ping Ko & Chao-Jung Chen & Mei-Hui Hou & Yu-Chuan Wang & Yeh Chen, 2023. "Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    3. Nathan P. Bullen & Cydney N. Johnson & Shelby E. Andersen & Garima Arya & Sonia R. Marotta & Yan-Jiun Lee & Peter R. Weigele & John C. Whitney & Breck A. Duerkop, 2024. "An enterococcal phage protein inhibits type IV restriction enzymes involved in antiphage defense," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    4. Shirin Fatma & Arpita Chakravarti & Xuankun Zeng & Raven H. Huang, 2021. "Molecular mechanisms of the CdnG-Cap5 antiphage defense system employing 3′,2′-cGAMP as the second messenger," Nature Communications, Nature, vol. 12(1), pages 1-9, December.
    5. Florian Tesson & Alexandre Hervé & Ernest Mordret & Marie Touchon & Camille d’Humières & Jean Cury & Aude Bernheim, 2022. "Systematic and quantitative view of the antiviral arsenal of prokaryotes," Nature Communications, Nature, vol. 13(1), pages 1-10, December.

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