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Pore-forming activity and structural autoinhibition of the gasdermin family

Author

Listed:
  • Jingjin Ding

    (National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences
    National Institute of Biological Sciences)

  • Kun Wang

    (National Institute of Biological Sciences)

  • Wang Liu

    (National Institute of Biological Sciences)

  • Yang She

    (National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences
    National Institute of Biological Sciences)

  • Qi Sun

    (National Institute of Biological Sciences)

  • Jianjin Shi

    (National Institute of Biological Sciences)

  • Hanzi Sun

    (National Institute of Biological Sciences)

  • Da-Cheng Wang

    (National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences
    Foshan University)

  • Feng Shao

    (National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences
    National Institute of Biological Sciences
    National Institute of Biological Sciences, Collaborative Innovation Center for Cancer Medicine, Beijing, 102206, China)

Abstract

Inflammatory caspases cleave the gasdermin D (GSDMD) protein to trigger pyroptosis, a lytic form of cell death that is crucial for immune defences and diseases. GSDMD contains a functionally important gasdermin-N domain that is shared in the gasdermin family. The functional mechanism of action of gasdermin proteins is unknown. Here we show that the gasdermin-N domains of the gasdermin proteins GSDMD, GSDMA3 and GSDMA can bind membrane lipids, phosphoinositides and cardiolipin, and exhibit membrane-disrupting cytotoxicity in mammalian cells and artificially transformed bacteria. Gasdermin-N moved to the plasma membrane during pyroptosis. Purified gasdermin-N efficiently lysed phosphoinositide/cardiolipin-containing liposomes and formed pores on membranes made of artificial or natural phospholipid mixtures. Most gasdermin pores had an inner diameter of 10–14 nm and contained 16 symmetric protomers. The crystal structure of GSDMA3 showed an autoinhibited two-domain architecture that is conserved in the gasdermin family. Structure-guided mutagenesis demonstrated that the liposome-leakage and pore-forming activities of the gasdermin-N domain are required for pyroptosis. These findings reveal the mechanism for pyroptosis and provide insights into the roles of the gasdermin family in necrosis, immunity and diseases.

Suggested Citation

  • Jingjin Ding & Kun Wang & Wang Liu & Yang She & Qi Sun & Jianjin Shi & Hanzi Sun & Da-Cheng Wang & Feng Shao, 2016. "Pore-forming activity and structural autoinhibition of the gasdermin family," Nature, Nature, vol. 535(7610), pages 111-116, July.
  • Handle: RePEc:nat:nature:v:535:y:2016:i:7610:d:10.1038_nature18590
    DOI: 10.1038/nature18590
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    1. Dao-Gong Zhang & Wen-Qian Yu & Jia-Hui Liu & Li-Gang Kong & Na Zhang & Yong-Dong Song & Xiao-Fei Li & Zhao-Min Fan & Ya-Feng Lyu & Na Li & Hai-Bo Wang, 2023. "Serum/glucocorticoid-inducible kinase 1 deficiency induces NLRP3 inflammasome activation and autoinflammation of macrophages in a murine endolymphatic hydrops model," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    2. Joo-Hui Han & Rajendra Karki & R. K. Subbarao Malireddi & Raghvendra Mall & Roman Sarkar & Bhesh Raj Sharma & Jonathon Klein & Harmut Berns & Harshan Pisharath & Shondra M. Pruett-Miller & Sung-Jin Ba, 2024. "NINJ1 mediates inflammatory cell death, PANoptosis, and lethality during infection conditions and heat stress," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    3. Fengxia Ma & Laxman Ghimire & Qian Ren & Yuping Fan & Tong Chen & Arumugam Balasubramanian & Alan Hsu & Fei Liu & Hongbo Yu & Xuemei Xie & Rong Xu & Hongbo R. Luo, 2024. "Gasdermin E dictates inflammatory responses by controlling the mode of neutrophil death," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
    4. Naijun Miao & Zhuning Wang & Qinlan Wang & Hongyan Xie & Ninghao Yang & Yanzhe Wang & Jin Wang & Haixia Kang & Wenjuan Bai & Yuanyuan Wang & Rui He & Kepeng Yan & Yang Wang & Qiongyi Hu & Zhaoyuan Liu, 2023. "Oxidized mitochondrial DNA induces gasdermin D oligomerization in systemic lupus erythematosus," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
    5. Yuan Lu & Wenbo He & Xin Huang & Yu He & Xiaojuan Gou & Xiaoke Liu & Zhe Hu & Weize Xu & Khaista Rahman & Shan Li & Sheng Hu & Jie Luo & Gang Cao, 2021. "Strategies to package recombinant Adeno-Associated Virus expressing the N-terminal gasdermin domain for tumor treatment," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    6. Stefania A. Mari & Kristyna Pluhackova & Joka Pipercevic & Matthew Leipner & Sebastian Hiller & Andreas Engel & Daniel J. Müller, 2022. "Gasdermin-A3 pore formation propagates along variable pathways," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    7. Hang Yin & Jian Zheng & Qiuqiu He & Xuan Zhang & Xuzichao Li & Yongjian Ma & Xiao Liang & Jiaqi Gao & Benjamin L. Kocsis & Zhuang Li & Xiang Liu & Neal M. Alto & Long Li & Heng Zhang, 2023. "Insights into the GSDMB-mediated cellular lysis and its targeting by IpaH7.8," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    8. Anja Kopp & Gregor Hagelueken & Isabell Jamitzky & Jonas Moecking & Lisa D. J. Schiffelers & Florian I. Schmidt & Matthias Geyer, 2023. "Pyroptosis inhibiting nanobodies block Gasdermin D pore formation," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    9. Fengqiao Li & Xue-Qing Zhang & William Ho & Maoping Tang & Zhongyu Li & Lei Bu & Xiaoyang Xu, 2023. "mRNA lipid nanoparticle-mediated pyroptosis sensitizes immunologically cold tumors to checkpoint immunotherapy," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    10. Samuel Speaks & Matthew I. McFadden & Ashley Zani & Abigail Solstad & Steve Leumi & Jack E. Roettger & Adam D. Kenney & Hannah Bone & Lizhi Zhang & Parker J. Denz & Adrian C. Eddy & Amal O. Amer & Ric, 2024. "Gasdermin D promotes influenza virus-induced mortality through neutrophil amplification of inflammation," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    11. Zhaoting Li & Fanyi Mo & Yixin Wang & Wen Li & Yu Chen & Jun Liu & Ting-Jing Chen-Mayfield & Quanyin Hu, 2022. "Enhancing Gasdermin-induced tumor pyroptosis through preventing ESCRT-dependent cell membrane repair augments antitumor immune response," Nature Communications, Nature, vol. 13(1), pages 1-15, December.

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