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Structure of the LH1–RC complex from Thermochromatium tepidum at 3.0 Å

Author

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  • Satomi Niwa

    (Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan)

  • Long-Jiang Yu

    (Faculty of Science, Ibaraki University, Mito, Ibaraki 310-8512, Japan)

  • Kazuki Takeda

    (Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan)

  • Yu Hirano

    (Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan)

  • Tomoaki Kawakami

    (Faculty of Science, Ibaraki University, Mito, Ibaraki 310-8512, Japan)

  • Zheng-Yu Wang-Otomo

    (Faculty of Science, Ibaraki University, Mito, Ibaraki 310-8512, Japan)

  • Kunio Miki

    (Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan)

Abstract

The light-harvesting core antenna (LH1) and the reaction centre (RC) of purple photosynthetic bacteria form a supramolecular complex (LH1–RC) to use sunlight energy in a highly efficient manner. Here we report the first near-atomic structure, to our knowledge, of a LH1–RC complex, namely that of a Ca2+-bound complex from Thermochromatium tepidum, which reveals detailed information on the arrangement and interactions of the protein subunits and the cofactors. The RC is surrounded by 16 heterodimers of the LH1 αβ-subunit that form a completely closed structure. The Ca2+ ions are located at the periplasmic side of LH1. Thirty-two bacteriochlorophyll and 16 spirilloxanthin molecules in the LH1 ring form an elliptical assembly. The geometries of the pigment assembly involved in the absorption characteristics of the bacteriochlorophyll in LH1 and excitation energy transfer among the pigments are reported. In addition, possible ubiquinone channels in the closed LH1 complex are proposed based on the atomic structure.

Suggested Citation

  • Satomi Niwa & Long-Jiang Yu & Kazuki Takeda & Yu Hirano & Tomoaki Kawakami & Zheng-Yu Wang-Otomo & Kunio Miki, 2014. "Structure of the LH1–RC complex from Thermochromatium tepidum at 3.0 Å," Nature, Nature, vol. 508(7495), pages 228-232, April.
  • Handle: RePEc:nat:nature:v:508:y:2014:i:7495:d:10.1038_nature13197
    DOI: 10.1038/nature13197
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    Cited by:

    1. Peng Cao & Laura Bracun & Atsushi Yamagata & Bern M. Christianson & Tatsuki Negami & Baohua Zou & Tohru Terada & Daniel P. Canniffe & Mikako Shirouzu & Mei Li & Lu-Ning Liu, 2022. "Structural basis for the assembly and quinone transport mechanisms of the dimeric photosynthetic RC–LH1 supercomplex," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
    2. Yuta Sawanaka & Masahiro Yamashina & Hiroyoshi Ohtsu & Shinji Toyota, 2022. "A self-complementary macrocycle by a dual interaction system," Nature Communications, Nature, vol. 13(1), pages 1-8, December.

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