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Reaching for high-hanging fruit in drug discovery at protein–protein interfaces

Author

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  • James A. Wells

    (University of California at San Francisco
    University of California at San Francisco)

  • Christopher L. McClendon

    (Graduate Group in Biophysics, University of California at San Francisco)

Abstract

Targeting the interfaces between proteins has huge therapeutic potential, but discovering small-molecule drugs that disrupt protein–protein interactions is an enormous challenge. Several recent success stories, however, indicate that protein–protein interfaces might be more tractable than has been thought. These studies discovered small molecules that bind with drug-like potencies to 'hotspots' on the contact surfaces involved in protein–protein interactions. Remarkably, these small molecules bind deeper within the contact surface of the target protein, and bind with much higher efficiencies, than do the contact atoms of the natural protein partner. Some of these small molecules are now making their way through clinical trials, so this high-hanging fruit might not be far out of reach.

Suggested Citation

  • James A. Wells & Christopher L. McClendon, 2007. "Reaching for high-hanging fruit in drug discovery at protein–protein interfaces," Nature, Nature, vol. 450(7172), pages 1001-1009, December.
  • Handle: RePEc:nat:nature:v:450:y:2007:i:7172:d:10.1038_nature06526
    DOI: 10.1038/nature06526
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    Cited by:

    1. Vladlena Kharchenko & Brian M. Linhares & Megan Borregard & Iwona Czaban & Jolanta Grembecka & Mariusz Jaremko & Tomasz Cierpicki & Łukasz Jaremko, 2022. "Increased slow dynamics defines ligandability of BTB domains," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    2. Fenglei Li & Qiaoyu Hu & Xianglei Zhang & Renhong Sun & Zhuanghua Liu & Sanan Wu & Siyuan Tian & Xinyue Ma & Zhizhuo Dai & Xiaobao Yang & Shenghua Gao & Fang Bai, 2022. "DeepPROTACs is a deep learning-based targeted degradation predictor for PROTACs," Nature Communications, Nature, vol. 13(1), pages 1-14, December.

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