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Living GenoChemetics by hyphenating synthetic biology and synthetic chemistry in vivo

Author

Listed:
  • Sunil V. Sharma

    (University of St Andrews
    BSRC, University of St Andrews)

  • Xiaoxue Tong

    (University of St Andrews
    BSRC, University of St Andrews)

  • Cristina Pubill-Ulldemolins

    (University of St Andrews
    BSRC, University of St Andrews)

  • Christopher Cartmell

    (University of St Andrews
    BSRC, University of St Andrews)

  • Emma J. A. Bogosyan

    (University of St Andrews
    BSRC, University of St Andrews
    Analytical Development, GSK, Cobden Street)

  • Emma J. Rackham

    (University of East
    University of East Anglia)

  • Enrico Marelli

    (University of St Andrews
    BSRC, University of St Andrews)

  • Refaat B. Hamed

    (University of St Andrews
    BSRC, University of St Andrews)

  • Rebecca J. M. Goss

    (University of St Andrews
    BSRC, University of St Andrews)

Abstract

Marrying synthetic biology with synthetic chemistry provides a powerful approach toward natural product diversification, combining the best of both worlds: expediency and synthetic capability of biogenic pathways and chemical diversity enabled by organic synthesis. Biosynthetic pathway engineering can be employed to insert a chemically orthogonal tag into a complex natural scaffold affording the possibility of site-selective modification without employing protecting group strategies. Here we show that, by installing a sufficiently reactive handle (e.g., a C–Br bond) and developing compatible mild aqueous chemistries, synchronous biosynthesis of the tagged metabolite and its subsequent chemical modification in living culture can be achieved. This approach can potentially enable many new applications: for example, assay of directed evolution of enzymes catalyzing halo-metabolite biosynthesis in living cells or generating and following the fate of tagged metabolites and biomolecules in living systems. We report synthetic biological access to new-to-nature bromo-metabolites and the concomitant biorthogonal cross-coupling of halo-metabolites in living cultures.

Suggested Citation

  • Sunil V. Sharma & Xiaoxue Tong & Cristina Pubill-Ulldemolins & Christopher Cartmell & Emma J. A. Bogosyan & Emma J. Rackham & Enrico Marelli & Refaat B. Hamed & Rebecca J. M. Goss, 2017. "Living GenoChemetics by hyphenating synthetic biology and synthetic chemistry in vivo," Nature Communications, Nature, vol. 8(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:8:y:2017:i:1:d:10.1038_s41467-017-00194-3
    DOI: 10.1038/s41467-017-00194-3
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    Cited by:

    1. Kevin B. Reed & Sierra M. Brooks & Jordan Wells & Kristin J. Blake & Minye Zhao & Kira Placido & Simon d’Oelsnitz & Adit Trivedi & Shruti Gadhiyar & Hal S. Alper, 2024. "A modular and synthetic biosynthesis platform for de novo production of diverse halogenated tryptophan-derived molecules," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
    2. Nguyet A. Nguyen & F. N. U. Vidya & Neela H. Yennawar & Hongwei Wu & Andrew C. McShan & Vinayak Agarwal, 2024. "Disordered regions in proteusin peptides guide post-translational modification by a flavin-dependent RiPP brominase," Nature Communications, Nature, vol. 15(1), pages 1-14, December.

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