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Ecological trade-offs drive phenotypic and genetic differentiation of Arabidopsis thaliana in Europe

Author

Listed:
  • Cristina C. Bastias

    (IRD
    Campus de Rabanales)

  • Aurélien Estarague

    (IRD
    Institut Agro Montpellier)

  • Denis Vile

    (Institut Agro Montpellier)

  • Elza Gaignon

    (IRD)

  • Cheng-Ruei Lee

    (National Taiwan University)

  • Moises Exposito-Alonso

    (Carnegie Institution for Science)

  • Cyrille Violle

    (IRD)

  • François Vasseur

    (IRD)

Abstract

Plant diversity is shaped by trade-offs between traits related to competitive ability, propagule dispersal, and stress resistance. However, we still lack a clear understanding of how these trade-offs influence species distribution and population dynamics. In Arabidopsis thaliana, recent genetic analyses revealed a group of cosmopolitan genotypes that successfully recolonized Europe from its center after the last glaciation, excluding older (relict) lineages from the distribution except for their north and south margins. Here, we tested the hypothesis that cosmopolitans expanded due to higher colonization ability, while relicts persisted at the margins due to higher tolerance to competition and/or stress. We compared the phenotypic and genetic differentiation between 71 European genotypes originating from the center, and the south and north margins. We showed that a trade-off between plant fecundity and seed mass shapes the differentiation of A. thaliana in Europe, suggesting that the success of the cosmopolitan groups could be explained by their high dispersal ability. However, at both north and south margins, we found evidence of selection for alleles conferring low dispersal but highly competitive and stress-resistance abilities. This study sheds light on the role of ecological trade-offs as evolutionary drivers of the distribution and dynamics of plant populations.

Suggested Citation

  • Cristina C. Bastias & Aurélien Estarague & Denis Vile & Elza Gaignon & Cheng-Ruei Lee & Moises Exposito-Alonso & Cyrille Violle & François Vasseur, 2024. "Ecological trade-offs drive phenotypic and genetic differentiation of Arabidopsis thaliana in Europe," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49267-0
    DOI: 10.1038/s41467-024-49267-0
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    References listed on IDEAS

    as
    1. Xiang Zhou & Peter Carbonetto & Matthew Stephens, 2013. "Polygenic Modeling with Bayesian Sparse Linear Mixed Models," PLOS Genetics, Public Library of Science, vol. 9(2), pages 1-14, February.
    2. Bates, Douglas & Mächler, Martin & Bolker, Ben & Walker, Steve, 2015. "Fitting Linear Mixed-Effects Models Using lme4," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 67(i01).
    3. Michal Gruntman & Dorothee Groß & Maria Májeková & Katja Tielbörger, 2017. "Decision-making in plants under competition," Nature Communications, Nature, vol. 8(1), pages 1-8, December.
    4. Mathieu Hanemian & François Vasseur & Elodie Marchadier & Elodie Gilbault & Justine Bresson & Isabelle Gy & Cyrille Violle & Olivier Loudet, 2020. "Natural variation at FLM splicing has pleiotropic effects modulating ecological strategies in Arabidopsis thaliana," Nature Communications, Nature, vol. 11(1), pages 1-12, December.
    5. Cheng-Ruei Lee & Hannes Svardal & Ashley Farlow & Moises Exposito-Alonso & Wei Ding & Polina Novikova & Carlos Alonso-Blanco & Detlef Weigel & Magnus Nordborg, 2017. "On the post-glacial spread of human commensal Arabidopsis thaliana," Nature Communications, Nature, vol. 8(1), pages 1-12, April.
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